Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1783 |
Symbol | |
ID | 6093234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1797108 |
End bp | 1797638 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642488980 |
Product | integral membrane protein-like protein |
Protein accession | YP_001739797 |
Protein GI | 170289559 |
COG category | [S] Function unknown |
COG ID | [COG5652] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000106195 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGT CTTTTCTGGT TCTAACCCTA ATACTGATGT GGATCGGTCT TGTTTTTTAC TTTTCATCGC AGCCTCCCGA TGTTTCTGGA AGGCAGTCCG GAAACGTCTA TAAATTCCTC AAAAAGGTAG ATAACGTTCT CGACTTCACC CAGACGAGAT GGTACAAAAA TTTGAGATCC CTACTCGAAA AATGGTGGTT CCCTGACAAG AAGCCAACGG GGGAAGATCT TGTCAGAAAA TCAGCCCATT TTGGACTTTA CTTTATAATG GGTATTCTTT CTTTCGTATT CAGTTATACT TATCTTAGAA AGTATGTGTT TTCTATTTTG ATGGGAACGT CTCTACCTAC ATTGATAGCC GTTCTCGATG AGTACAACCA GATTTTTCAC AACAGAGGAT CTTCACTGTA CGATGTGTTC ATAGACATGA ACGGTGCCCT GTTTGGAGTG GTGATTGCCC TTCTGACGCT GGTTGTTGTG AGGTTGATCA CCCGAGCGTA CAATGTCCGC CGGGGAGGGG GGATAGTATG A
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Protein sequence | MKRSFLVLTL ILMWIGLVFY FSSQPPDVSG RQSGNVYKFL KKVDNVLDFT QTRWYKNLRS LLEKWWFPDK KPTGEDLVRK SAHFGLYFIM GILSFVFSYT YLRKYVFSIL MGTSLPTLIA VLDEYNQIFH NRGSSLYDVF IDMNGALFGV VIALLTLVVV RLITRAYNVR RGGGIV
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