Gene TRQ2_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1756 
Symbol 
ID6093207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1773639 
End bp1774184 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID642488953 
Producthelix-hairpin-helix repeat-containing competence protein ComEA 
Protein accessionYP_001739770 
Protein GI170289532 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGACTCA GAAAGCAACA TCAAAGAACA ATTCTATTCG TGGCACTTGT TTTCTTCATA 
TTGCTTGGAA TTGTTATGGA ACGAGAAACG AAAACAGAAG AGGACACAAC ATCCTCTCAG
AAGGTTGTCG CCTTTCCTGT GGAGCTGAAC ACCGCTTCTC TGGAAGACTT GATGTCGATT
CCAGGGATCG GGCCTGTGAA AGCCCAGAGG ATCATCGATT ACAGAGAGTC ACATGGTGGA
TTTTCGAGCG TGGAAGAATT GAAGAACGTC TCTGGAATCG GAGAAAAAAC CCTGGAGAAG
ATTTCCAGAT ATGTGACCGT CGAAGGAGTT GAACAACATA TCAAAAGAGA AGTCACAAAA
CTGAACGTGA ACACAGCTTC GGTTGAAGAA CTCGAAACCC TTCCCTACAT AGGTGAGGTA
AAGGCAAAAG CCATTGTCGA GTACCGAGAG AAAAACGGTC CCTTTCGTTC TCCCGAAGAT
CTTCTGGACG TGCCTGGAAT AGGTGAAAAG ACGCTGGAGA AAATAAGAGG AAAAATCACA
TTTTGA
 
Protein sequence
MRLRKQHQRT ILFVALVFFI LLGIVMERET KTEEDTTSSQ KVVAFPVELN TASLEDLMSI 
PGIGPVKAQR IIDYRESHGG FSSVEELKNV SGIGEKTLEK ISRYVTVEGV EQHIKREVTK
LNVNTASVEE LETLPYIGEV KAKAIVEYRE KNGPFRSPED LLDVPGIGEK TLEKIRGKIT
F