Gene TRQ2_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1732 
Symbol 
ID6093183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1749457 
End bp1751346 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content48% 
IMG OID642488931 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001739748 
Protein GI170289510 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.210684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATTTT ACATCACCAC CCCAATCTAC TACGTGAATT CTGAGCCTCA CATAGGAAGT 
GCCTACACCA CTATTGTAGC CGATATCATC GCTCGCTACA AACGTTTCAT GGGTTACGAT
GTGTTCTTTC TCACGGGAAC GGACGAACAC GGCCAGAAGG TCCTGCAGGC AGCCCAGCAG
GCTGGAAAGG ACCCGCAGGA ATTCTGTGAC GAACTGGCTG AAAAGTTCAA ACAGCTCTGG
AAAGAACTGA AGATCACGAA CGATTATTTC ATCCGAACCA CAGACGAAAT GCACATGAAA
ACCGTCCAGG AATTCGTTGC GAAGATGAAA GAAAACGGAG ACGTCTACAA GGGCATCTAC
AAGGGATGGT ACTGTGTCCC CTGTGAGACG TTCTGGAACG AGGACGAGGT TATAAAGGAA
GGAGAAGAAC GTTTCTGTCC GGAGTGTAAA AGACCCGTCA AATGGGTGGA GGAAGAGAAT
TACTTCTTCA GACTTTCGAA ATACAGAGAT CCTCTCCTGA AGTACTACGA GGAGCATCCC
GATTTTGTGG AACCGGACTT CAGAAGAAAC GAGATGCTGA AGATTCTCGA AGGTGGTCTC
AAAGACCTGA GCATCACCAG GACGACCTTC AAATGGGGCG TTCCCATGAA GGACGATCCG
GAACACGTGA TCTACGTGTG GGTGGACGCG CTCATAAATT ACATATCCGC TATAGGATAC
GGCTGGAACG ATGAGATGTT CAATAAATGG TGGCCTGCAG ATTTGCATCT GATAGGAAAA
GAAATAAACA GATTCCACTC CATCATATGG CCTGCGATGC TCATGTCGGT TGGACTCCCA
CTTCCAAAAA AGGTGTTCGC ACACGGGTGG CTCACGGTGA ACGGCCAGAA GATCAGTAAG
TCCCTCGGCA ACGCTATAGA CCCCAGATTC TTCGTGAAGA GATACGGCAA CGACGTGGTG
AGGTATTACC TGATACGGGA TATCATGTTC GGAAAAGACG GCGATTTCTC GGAGGAAAGG
CTCGTCCACA GATTGAATTC CGATCTCGCG AACGACTACG GAAATCTCCT TCACAGGATC
ACGGCTATGA TAAAGAAGTA TTTCAACGGA AGACTTCCTT CTCCTTCTGC TCAGGAAGGG
CTCGATAGCT GGCTGAAGGA GAGATTCTTC GAAACAAAAG ACGCTTACCA TGAACTCATG
GATTCCTACC GGCTCACAGA AGCCCTGGAC AAGATATGGG AGTTCATAGC AGATGTGAAC
AAGTACTTCA ACGACACGAA GCCCTGGATA CTTGGAAAAG AGGGAAATAT GGAAAGGCTC
GGAACGGTGC TGTACAACTC ACTGGAGGCC GTGTTCAAGG TGGCTCTGAT GACACTCCCG
GTGATGCCAG ACACCTCCAA AGAAGTGTTC AGGAGAGTGT CCTTTGAAGA AAAGCCTTCG
AAGGAACATC TGGAAAACTG GGGAGTTCTG AAGTCTGGTT CCACAGTGGT CCACGGCGAA
CCTCTCTTCA GAAAAATCGA CGCGAAAGAC TTCAAAAAGG TGGTGGAGAC GGTGTCGGTC
GAACAGAACG TGATCACAAT AGATGATTTT TCCAAAGTAG ATCTCAGAAT TGCAAAGGTC
CTCGAAGCGG AGAAGGTTCC AAATTCCAGA AAACTTCTCA GATTGATAAT CGATCTTGGA
ACGGAAAAGA GACAGATAGT GGCGGGAATT GCAGAACACT ACAAACCCGA AGAACTCGTA
GGAAAACTGA TCGTCGTTGT CGCTAATTTA AAACCCGCAA AACTCATGGG CATAGAGTCT
CAGGGAATGC TCCTCGCCGC AAAGTCCGGC GATACCTTGA GACTTTTGAC TGTAGATGGA
GAAATCACAC CAGGTGCGAA GGTGTCATGA
 
Protein sequence
MKFYITTPIY YVNSEPHIGS AYTTIVADII ARYKRFMGYD VFFLTGTDEH GQKVLQAAQQ 
AGKDPQEFCD ELAEKFKQLW KELKITNDYF IRTTDEMHMK TVQEFVAKMK ENGDVYKGIY
KGWYCVPCET FWNEDEVIKE GEERFCPECK RPVKWVEEEN YFFRLSKYRD PLLKYYEEHP
DFVEPDFRRN EMLKILEGGL KDLSITRTTF KWGVPMKDDP EHVIYVWVDA LINYISAIGY
GWNDEMFNKW WPADLHLIGK EINRFHSIIW PAMLMSVGLP LPKKVFAHGW LTVNGQKISK
SLGNAIDPRF FVKRYGNDVV RYYLIRDIMF GKDGDFSEER LVHRLNSDLA NDYGNLLHRI
TAMIKKYFNG RLPSPSAQEG LDSWLKERFF ETKDAYHELM DSYRLTEALD KIWEFIADVN
KYFNDTKPWI LGKEGNMERL GTVLYNSLEA VFKVALMTLP VMPDTSKEVF RRVSFEEKPS
KEHLENWGVL KSGSTVVHGE PLFRKIDAKD FKKVVETVSV EQNVITIDDF SKVDLRIAKV
LEAEKVPNSR KLLRLIIDLG TEKRQIVAGI AEHYKPEELV GKLIVVVANL KPAKLMGIES
QGMLLAAKSG DTLRLLTVDG EITPGAKVS