Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1676 |
Symbol | |
ID | 6093126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1698931 |
End bp | 1700043 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642488877 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001739694 |
Protein GI | 170289456 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000661006 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAGG TACTGGTAAC GGTTCTTCTT GTATTTACGG TTTTGAGTCT TTTCTCGGCC GTTAGGATCG CTGTGATTCT TCCAATGACG GGTGGTATTT CCGCTTTTGG AAGAATGGTG TGGGAAGGAA TTCAGATCGC TCACGAAGAG AAACCAACAG TTTTGGGAGA AGAGGTAGAA CTCGTTCTCC TCGACACCAG AAGTGAAAAA ACAGAAGCAG CGAACGCAGC AGCAAGAGCC ATTGACAAAG AAAAGGTCCT CGCAATAATC GGTGAAGTGG CCAGTGCACA TTCTCTTGCC GTAGCACCTA TTGCAGAAGA GAACAAAGTT CCTATGGTGA CTCCTGCCTC CACGAATCCA CTCGTAACAC AGGGAAGAAA GTTCGTATCC AGGGTTTGTT TCATCGACCC GTTCCAGGGA TCAGCCATGG CAGTATTCGC TTACAAAAAT CTGGGTGCAA AAAGAGTAGC TGTGTTCACG GATGTCGAGC AGGACTACAG CGTCGGACTC TCTAATTTCT TCAAAGACAA GTTCACTGAA CTCGGCGGAC AGGTGAAGAG CGTGCTCTTC AGAAGCGGTG ATCAGGACTT TTCCGCACAG CTTTCCGTTG CGATGTCGTT CAACCCGGAT GCAATCTACA TAACAGGGTA CTACCCGGAG ATCGCCCTCA TCTCCAGACA GGCAAGACAG CTTGGATTCA CCGGTTACAT TCTGGCAGGT GATGGTGCAG ACGCACCGGA ACTCATAGAA ATCGGTGGAG AAGCAGTGGA AGGACTCCTC TTCACCACAC ACTACCATCC GAAGGCAGCC AGCAACCCTG TTGCAAAGAA GTTCGTTGAA GTGTACAAGG AGAAATACGG AAAAGAACCA GCTGCGCTCA ACGCTCTCGG ATACGATGCT TACATGGTGC TTCTCGACGC GATCGAAAGG GCAGGAAGCT TTGACAGGGA AAAGATCGCT GAAGAGATCA GAAAAACAGA GAATTTCAAC GGTGCCAGCG GTATCATAAA CATCGACAAG AACGGAGACG CCATCAAATC CGTCGTTGTA AACGTTGTGA AGAACGGTTC AGTTGACTTT GAGGCTGTCA TCAATCCTGA TGATCTCAAG TAA
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Protein sequence | MRKVLVTVLL VFTVLSLFSA VRIAVILPMT GGISAFGRMV WEGIQIAHEE KPTVLGEEVE LVLLDTRSEK TEAANAAARA IDKEKVLAII GEVASAHSLA VAPIAEENKV PMVTPASTNP LVTQGRKFVS RVCFIDPFQG SAMAVFAYKN LGAKRVAVFT DVEQDYSVGL SNFFKDKFTE LGGQVKSVLF RSGDQDFSAQ LSVAMSFNPD AIYITGYYPE IALISRQARQ LGFTGYILAG DGADAPELIE IGGEAVEGLL FTTHYHPKAA SNPVAKKFVE VYKEKYGKEP AALNALGYDA YMVLLDAIER AGSFDREKIA EEIRKTENFN GASGIINIDK NGDAIKSVVV NVVKNGSVDF EAVINPDDLK
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