Gene TRQ2_1671 details

Gene Information

• Locus tag: TRQ2_1671
• ID: 6093121
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 1694654
• End bp: 1695301
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642488872
• Product: CBS domain-containing protein
• Protein accession: YP_001739689
• Protein GI: 170289451
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3448] CBS-domain-containing membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGTCA AGGATTTCAT GACGAGAAAT CCCATCACCA TCGCTCCAGA GACCTCTTTT 
TCTGAGGCCC TCAAACTCAT GAAACAGAAC AAAATCAAAC GCCTCATAGT GATGAAGGAT 
GAAAAGATCG TCGGTATCGT GACAGAAAAG GACCTTCTCT ACGCATCTCC CTCTAAAGCC 
ACGACACTAA ACATCTGGGA ACTCCACTAT CTTCTTTCCA AGCTCAAAAT CGAGGAGATC 
ATGACAAAAG ATGTCGTCAC AGTGAACGAA AACACACCGA TAGAAGACGC GGCAAGGATA 
ATGGAGGAGA AGGATATAAG TGGACTCCCC GTAGTTGACG ATGCGGGACA TCTTGTTGGA 
ATCATCACAC AGACTGATAT CTTCAAGGTC TTCGTAGAGA TATTCGGAAC CAAGAGGGAA 
GGAACCATAA GGTACACAAT GGAAATGCCA GACAAACCGG GTGAACTTCT CGAAGTGGCA 
AAGAGAATCT ACGAAGCAGG CGGGAACATC ATCTCCATCG CAACACTTTT CGAAGAAGGG 
AAGGATTCTT ACCTTGCCAC ACTCAGGGTG GAAAACATCG ACCATGAAAA GTTCGTGAAA 
TCCCTCGATG AAATCGATGT GAAGCTTCTG TACTACCATT CAAACTGA 

 

Protein sequence

MLVKDFMTRN PITIAPETSF SEALKLMKQN KIKRLIVMKD EKIVGIVTEK DLLYASPSKA 
TTLNIWELHY LLSKLKIEEI MTKDVVTVNE NTPIEDAARI MEEKDISGLP VVDDAGHLVG 
IITQTDIFKV FVEIFGTKRE GTIRYTMEMP DKPGELLEVA KRIYEAGGNI ISIATLFEEG 
KDSYLATLRV ENIDHEKFVK SLDEIDVKLL YYHSN