| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1646 |
|---|
| Symbol | |
|---|
| ID | 6093096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1668545 |
|---|
| End bp | 1669258 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642488847 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001739664 |
|---|
| Protein GI | 170289426 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAACTGG GCATCAGGGG TAAAAGCGCC CTCGTTCTTG CAGGAAGCAG GGGAATAGGA
AGGGCAGTTG CAGATGCCCT GAGGGAAGAA GGTGTCAGGG TTGTGGTCTG TTCAAGAAAC
GAGGAACTGT TGAAGAAAAC AGGACACGAG TATGTGGTCT GTGATCTGAA GAGAGAGCCA
GACAGGTTGT TTGAGAGGAT AAAAGAGGTG GACATCCTCG TTCTGAACAT GGGAGGACCA
AAACCGGGAT ACCTCGACGA TCTGACGGAT GAAGATTTCA AAGATGCCAT CGACGGTCTG
TTCCTGAACA TGGTGAAGAT CGTGAGGAAC TATCTTCCCG ATATGAAGAG AAAGCGCTGG
GGAAGAATCG TTGCCATCAC TTCTTTCTCC GTGGTCTCTC CTCTGGAGAA CCTCTACACT
TCGAACTCTG CAAGAATGGC CCTCACAGGT TTTCTGAAGA CACTTTCCTT CGAAGTGGCC
CCGTACAACA TCACCGTGAA CTGTGTGGCA CCCGGCTGGA CCGAAACGGA GAGAGTGAAA
GAACTTCTCG ATGAGGACAA AAAAAGACAG GTGGAATCAC AGATTCCCAT GAAGAGGATG
GCGAAACCTG AGGAGATAGC AAACGTGGTG GCCTTTCTGT GTTCTGAGAA GGCTTCCTAC
ATCACGGGAC AGACCGTTGT TGTAGATGGA GGCCTTTCGA GATTTCCCCT CTGA
|
|---|
| Protein sequence | MELGIRGKSA LVLAGSRGIG RAVADALREE GVRVVVCSRN EELLKKTGHE YVVCDLKREP
DRLFERIKEV DILVLNMGGP KPGYLDDLTD EDFKDAIDGL FLNMVKIVRN YLPDMKRKRW
GRIVAITSFS VVSPLENLYT SNSARMALTG FLKTLSFEVA PYNITVNCVA PGWTETERVK
ELLDEDKKRQ VESQIPMKRM AKPEEIANVV AFLCSEKASY ITGQTVVVDG GLSRFPL
|
|---|
| |