| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1619 |
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| Symbol | |
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| ID | 6093068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1635482 |
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| End bp | 1637383 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642488820 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001739638 |
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| Protein GI | 170289400 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00276535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG TTCTTGTGTT CGTGTTTTTA GTCCTCAGCG CTATTTCAGC GGTAATGGCT
CAGATGCTAC CACCTGGTAT CCCTAGGGAA AAGACGTTGA TACTGCCTTT CCTCTTTGCA
CCACTTCCCG CACCAGGTAA CTGGAACCTC TGGGCAGGAT GGAGAGCTCA AAACTGCGGT
CTTCACCAGT TCGTCACCGA ACCTCTCTGG ACCATCAACC CCAACCCTGA GGAAGGCGGG
ATCATCAACG CACTCGCTGC GGAGCCTCCT ATCTACAACG AAGACTTCAC AAAGCTTACG
ATCAAACTCA GAAAAGGAAT TTACTGGAGC GACGGGGTTG AATTCACAGC GGACGACTTT
GTGTTCACGA TTAAAACGGT GAAAGACACA CCCGGTCTGG ATTATCACGG CCCGATGCAA
GATGTGAAAG ATGTCTACGC CCTTGACAAG TACACGGTCG TTGTGGAACT TGAGAGACCA
AACAGTAGGT TCCATGCCTA CTTTGTTGAA AGATGGAATG CATTAAGACC TATGCCAAAA
CACATCTTCG AAAAGGTAAA AGATGTGGTA TCCTTCGACT TCAACCCACC TGTAAGCTTA
GGACCATACG TTTTGAAAGA TTATGACCCC GCAGGATACT GGGTGCTCTG GGAGAAGAGA
AAAGACTGGC AGAGAACAGT CACTGGTCAA CTCTTCGGTG AACCTGTTCC TGAGTACGTC
CTCTTCATAA ACTACGGTAC TCCTGAGAAG AACACGATGG CTATGCTGAG GCACGAACTG
GACGTTCTTC AGGGATCGGC AGAACAATTG ATTACACTTC TGAGAATGAG CAAAAATACC
AGAAGTTACA GAAAAACATG GCCATACATA GATCCAAGAG ATATTTCCAC GAGAGGACCT
GGTTTCAACT TCATGGTGTA TCCGTACAAC ATCAAAGACG TGAGATGGGC ACTAGCTTTG
TCCATAGACA TAGTAAAACT CGCCATTTCA ACGTACGACG GAATGGTCGC TATGACTCCA
GGACTTCCTC TGGTTGTCAA CAAAAACTTC TACGAATGGT ATTTCAAGAG ACTGGAACCG
TGGCTGGGGG AACTAGCACT GGATCTTGGA AACGGTGAAA CCTTCAAACC GTGGGATCCA
CAGGCTCCAT GGAAACTCCT GGAATGGGCT CAGAAAATGT ACAAAGTGGA TATCGATCCA
AATAATGAAG AGGAAGTGCG TCTGACTCTG GGTTACGGCT GGTGGAAATA CGCTCCAGAT
GCAGCGGAGA AACTGTTGAA AAAACATGGT TTCTACCGCG ATGAAAACGG AAAATGGCAT
CTACCAAATG GTGACCTGTG GAAGATAACC ATACTCAGAG GCCCAGATCC TACAGATATG
GCTAACATCA TCATAGAGGG AATCGCCGAA CAGTGGAAAG AATTCGGTAT AGATGTCGTC
TTCAATGTCT CCTCTGCCGC TGCGACGCTC GCAGGTGAAG GACGGTTTGA GGTGGTCAAC
ACAGCACACG GTGGTTTTGC TGGTGAACCA TGGGGATTCC ATCCGGATCT TTACAGATGT
TTCAATGCGT TCAGAAGCGA TTTTGTAAAA CCCATTGGTG AACTGACACT TGGTAGTGCT
CTTAGGTGGA GTGATCCCAG AATGGACAAA ATCATAGAGG AACTCGAAAA AACAGACTGG
AACGATTACG AAAAAGTTAT AGATCTTGGA GTCGAAGGAT TGAAGCTCGA AATTGAAGAG
ATGGTAGCAA TACCGGTGTT CAACTGTCCT ATAACGATCG TCTTCGATGA GTATTACTGG
ACCAACTTCC CAAGTCCAGA AAACGATTAT GCGAGATGTG ACAACTTCAC CACCTGGCCC
CAGCTGAAGT ACCTGCTCCA CATGGTCAAA CCTGCTAAAT GA
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| Protein sequence | MKKVLVFVFL VLSAISAVMA QMLPPGIPRE KTLILPFLFA PLPAPGNWNL WAGWRAQNCG
LHQFVTEPLW TINPNPEEGG IINALAAEPP IYNEDFTKLT IKLRKGIYWS DGVEFTADDF
VFTIKTVKDT PGLDYHGPMQ DVKDVYALDK YTVVVELERP NSRFHAYFVE RWNALRPMPK
HIFEKVKDVV SFDFNPPVSL GPYVLKDYDP AGYWVLWEKR KDWQRTVTGQ LFGEPVPEYV
LFINYGTPEK NTMAMLRHEL DVLQGSAEQL ITLLRMSKNT RSYRKTWPYI DPRDISTRGP
GFNFMVYPYN IKDVRWALAL SIDIVKLAIS TYDGMVAMTP GLPLVVNKNF YEWYFKRLEP
WLGELALDLG NGETFKPWDP QAPWKLLEWA QKMYKVDIDP NNEEEVRLTL GYGWWKYAPD
AAEKLLKKHG FYRDENGKWH LPNGDLWKIT ILRGPDPTDM ANIIIEGIAE QWKEFGIDVV
FNVSSAAATL AGEGRFEVVN TAHGGFAGEP WGFHPDLYRC FNAFRSDFVK PIGELTLGSA
LRWSDPRMDK IIEELEKTDW NDYEKVIDLG VEGLKLEIEE MVAIPVFNCP ITIVFDEYYW
TNFPSPENDY ARCDNFTTWP QLKYLLHMVK PAK
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