Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1566 |
Symbol | |
ID | 6093014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1576780 |
End bp | 1577430 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642488766 |
Product | HAD family hydrolase |
Protein accession | YP_001739585 |
Protein GI | 170289347 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGG TGATTTTCGA CATGGATGGA GTGCTCATGG ACACAGAGCC TCTCTACTTC GAAGCTTACA GAAGAGTCGC GGAAAGCTAT GGAAAACCTT ACACGGAGGA TCTCCACAGG AGAATAATGG GAGTTCCTGA AAGAGAAGGT CTTCCCATCC TCATGGAAGC TCTGGAGATA AAAGATTCTC TGGAGAACTT CAAAAAGAGG GTCCACGAAG AAAAAAAGCG CGTTTTCTCT GAGCTTCTCA AGGAAAATCC GGGTGTAAGA GAGGCGCTCG AGTTCGTAAA GAGCGAAAGA ATAAAACTCG CGCTCGCAAC CTCCACACCA CAGCGAGAAG CGCTGGAGAG ATTGAGAAGA CTCGATCTCG AAAAGTACTT CGACGTCATG GTGTTCGGTG ATCAGGTGAA GAACGGAAAG CCTGATCCAG AGATATACCT TCTCGTTCTG GAAAGGTTGA ATGTGGTCCC AGAGAAGGTT GTGGTCTTCG AAGACTCAAA GAGCGGTGTT GAAGCCGCAA AAAGCGCCGG CATAGAAAGA ATCTATGGAG TCGTTCACTC TTTGAACGAC GGTAAAGCGC TTCTTGAAGC GGGTGCGGTT GCTCTGGTGA AACCCGAGGA AATCCTGAAC GTTCTCAAAG AGGTTCTTTA A
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Protein sequence | MEAVIFDMDG VLMDTEPLYF EAYRRVAESY GKPYTEDLHR RIMGVPEREG LPILMEALEI KDSLENFKKR VHEEKKRVFS ELLKENPGVR EALEFVKSER IKLALATSTP QREALERLRR LDLEKYFDVM VFGDQVKNGK PDPEIYLLVL ERLNVVPEKV VVFEDSKSGV EAAKSAGIER IYGVVHSLND GKALLEAGAV ALVKPEEILN VLKEVL
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