| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1548 |
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| Symbol | |
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| ID | 6092996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1557050 |
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| End bp | 1557517 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642488748 |
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| Product | type IV pilin-related protein |
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| Protein accession | YP_001739567 |
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| Protein GI | 170289329 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000491286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAGAA GAGCGGGTTT CACGTTGATT GAGCTTTTGA TCGTCATGGC TATCATCGCG
GCTTTGATGG CAGTGCTCAT TCCGACCGCA ACAGGTGCGA TGAAGAAGGC GAGGGCGACA
AGGCTTGCGG TTCAGCTCAG AAACTACGTA ACAGGTCTTC AGCAGTGGAT CACAGCAACA
TTACCGACAT CAGATGATGT TGCCGATTTG GACGTTGACA ATGCAGTTTC CATGGGATTT
GTTGGCCAGG CAGAAAGAGA TCTGTTTGCA AATGGCACAG ACTTTAACGC CGACGCTGCT
AACAGCCGCA TAGTGATCAC CGTTGATTAC GACACAAATG ATTCAAACAT AGCCAACCTG
GTCTACAACA GTTTGAAAGA CGTATTTGCT GGAGGTACTG GGAGTGCAAC TGTGACGAAT
GACACTGAAA TTGGAATAAC CGCTTATGTC CAGGCCTTCT GGTGGTAA
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| Protein sequence | MRRRAGFTLI ELLIVMAIIA ALMAVLIPTA TGAMKKARAT RLAVQLRNYV TGLQQWITAT
LPTSDDVADL DVDNAVSMGF VGQAERDLFA NGTDFNADAA NSRIVITVDY DTNDSNIANL
VYNSLKDVFA GGTGSATVTN DTEIGITAYV QAFWW
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