Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1500 |
Symbol | |
ID | 6092948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1509404 |
End bp | 1510216 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642488707 |
Product | ABC-2 type transporter |
Protein accession | YP_001739526 |
Protein GI | 170289288 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTTC TGATCAAAAC GTTGTACTTC ATTAGAAAAG ATATCCTCAT CTGGCTTTCT TACAGAACAC AGCTTGTTCT CGGGCTCTTA TCCGGTTTTG TGGGAATTGT CCAGTTCGGT TTCATTGGAA AATTCATCGC ACAGGGGAAC TACTTTCCCC TGATAGAGCG ATACGGTGGT GACATCCTGG CGTACTTCAT CACTGGTTCT GTTTTCATGT CTTACACGAA TCTTGCCCTC ATGACCTTCA AAGGTGTCAT ACAGAGAGAA CAGAGCATGG GAACTCTCGA GTACATCCTT CTTTCAAAGA CACCTCTCTG GCAGCTTTTT CTCTTCAGTT TCGTGTCTTC CTTCTTTTTC ACCACGCTGA ACATCACACT GATTTTTCTG GGACTGGTCT ATCTCTTCTC GGTTCATATC ACACCGAACT TTCTTGAAGC CCTGGTTGTT CTTTTCACTG TAATGCTTCC TCTCATGGGT ATTGGCCTTC TCTCTGCGTC CATCGTTCTC GTCACAAAAA GAGGAGATCC TGTGGGGTGG CTTTACACCA CACTCAGTGG CTTGTTTTCT GGTATCTACT TTCCCGTGGA AATTCTTCCA GACTGGATAA GACCTGTTTC GTACCTCATT CCCAGCACGT ATGGCATAGA TCTTTTGCGA AGAGTCCTCA TGAGAGGCGA ACACCTCTCC AGTGTGTCGG AAGGACTGGT TCTTCTTGCA GCAACAGGAA CAGTGTTGAT ATCAGCGGGA ATCGTTGCGT TCAAAAGATC CTTCAATCAG GCCCGATTGA GAGGAAGTCT GAGCTGGTAC TGA
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Protein sequence | MKLLIKTLYF IRKDILIWLS YRTQLVLGLL SGFVGIVQFG FIGKFIAQGN YFPLIERYGG DILAYFITGS VFMSYTNLAL MTFKGVIQRE QSMGTLEYIL LSKTPLWQLF LFSFVSSFFF TTLNITLIFL GLVYLFSVHI TPNFLEALVV LFTVMLPLMG IGLLSASIVL VTKRGDPVGW LYTTLSGLFS GIYFPVEILP DWIRPVSYLI PSTYGIDLLR RVLMRGEHLS SVSEGLVLLA ATGTVLISAG IVAFKRSFNQ ARLRGSLSWY
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