Gene TRQ2_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1475 
Symbol 
ID6092921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1482794 
End bp1483759 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID642488681 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001739502 
Protein GI170289264 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
[COG4109] Predicted transcriptional regulator containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTT CCATCATAGA CAGATTGCAA GCCATCTTCC AGGATGTCAG AGTTTCCGAG 
TTCATGAATC CGGATGTGAT ATATGTAACG CCGGACAAGA CACTTCTTCA CGTGAAAGAG
ATTATGAGGA TAAAGAGGAT CTCAGGTGTG CCCGTAGTGG ATGACAAAAA ACGGGTGGTG
GGAATCGTCA GTCTGGAAGA CATCATAAAG GCCCTCGAGG GAAGTTACAT AAAAGACAGT
GTTGAAAAGC GCATGACGAA GAACGTGGTA TGTCTGAAAG AAACAGACAC CCTCCAGGAC
GCCGTCAAGA CCTTTGAGAA ATACGGTTAT GGGAGATTTC CCGTTGTCGA CGATGAGGGA
AAACTGGTGG GGATCGTGAC AAAGCACGAC ATCATCTATT TTCTCCTGGC AAAACTCGGT
ATCATGTATC TGCACGACAA AAGGATGGAA GAAGTCCTGG AAAAAGGAAC TTCACTGATC
ACGGGAGAAG TCCTGGAAAA AGGAAAAGCG GATTTTGTTT TCCACATAGA TTACTTCGAT
GTGAACATGA TCGGGATAGG GGCTTCCAAA TTGAAGAGGT TTCTCCTGGA GCGAGGAGTG
GATGAAGAAC TGGCAAGAAG AATCGCAATA GCTACTTACG AAGCGGAAGC AAACGTTGTC
ATTCACAGCG AATCCGATGG GTACATATAC TGCTTCATCG ACAATGAGAA AATCACGGTG
AGGGTAGAAG ACAGAGGAAA AGGGATAGAA AATCTGGAAC TCGCGATGAG AGAAGGCTAT
TCAACGGCTC CAGACCACAT CAGAGAGCTC GGCTTTGGTG CAGGGATGGG GCTTCCAAAC
ATGAAAAGGT ACTCCGATAA AATGGTCATC ATCTCAGAAG TGGGAAAGGG TGTAATCGTT
GAGATGGTGT TCTTCAGGAG GGATAGAGGT GAGGATAAGG GAGATAGTGG AAAAACTGGG
GCTTGA
 
Protein sequence
MSVSIIDRLQ AIFQDVRVSE FMNPDVIYVT PDKTLLHVKE IMRIKRISGV PVVDDKKRVV 
GIVSLEDIIK ALEGSYIKDS VEKRMTKNVV CLKETDTLQD AVKTFEKYGY GRFPVVDDEG
KLVGIVTKHD IIYFLLAKLG IMYLHDKRME EVLEKGTSLI TGEVLEKGKA DFVFHIDYFD
VNMIGIGASK LKRFLLERGV DEELARRIAI ATYEAEANVV IHSESDGYIY CFIDNEKITV
RVEDRGKGIE NLELAMREGY STAPDHIREL GFGAGMGLPN MKRYSDKMVI ISEVGKGVIV
EMVFFRRDRG EDKGDSGKTG A