Gene TRQ2_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1458 
Symbol 
ID6092903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1466397 
End bp1467638 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content47% 
IMG OID642488663 
ProductSufS subfamily cysteine desulfurase 
Protein accessionYP_001739485 
Protein GI170289247 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTCAA CAGGATTGTA TGAGGACTTT CCCACTTTGA AGATGAAGAT TAACGGAAAA 
AGGATCGTTT ATCTGGACAG CGCGGCCACC ACACTGAAGC CAAAACAGGT TGTGAAAAAG
CTGGAGGAAT TCTACTACAA CAGCTACGCG AACGTTCACA GAGCAGTTCA TACTCTCGCC
GTGCGTGCCA CCACCGAACT CGAGGAAACC AGGGAGGAAT TTGCAGAGTT CCTGGGTGTT
TTTCCGCAGG AGATAATCTT CACTTCGGGC ACCACCATGG CCATAAATCT CGTTGTGATG
TCCCTTCTGA GGAGCGGCAT ATTGAAAAAG GACGATCTGG TTCTGGTTTC CCTTCTGGAA
CACCACGCGA ACTTTGTACC CTGGCTAAGA CTTTCGAAAC TCCATGGGTA CAGGATCGAC
TTCATCAAGC CCTCGGGAAG ATTCGGAACA CTCGAGATGG ATGACCTGTT GAAACACAGA
GACAAAAACC CGAAAGTCGT TGCCATAACA GGCCTTTCCA ACGTGACCGG TCAAAGAATA
CCCGTTGAAG AGCTGAGAAA CGTCTTTCCT AATTCCATCA TTCTCCTGGA TGGTGCTCAA
CTGATACCTC ATGAACCGGT GAAACCGAAG GAGATAGGAG TAGATTTTCT TGCCTTTTCA
CTCCACAAGA TGCTCGGTCC CACCGGTGTG GGTGTGCTTT ACGGAAAGAG AGAGCTGATG
GAACAGATGG AACCGTTTCT CTACGGCGGA GAGATGATCG ACAGAGTGTC CCTCGAAGAC
GTCACATTCA ACGAATTACC TTACAAGTTC GAAGCGGGAA CTCCAAACAT AGCGGATATA
GTCGCATCCA GGGAAGCCTT GAGGTATTTG AAAGAAACGG GTTTCGATTC AGTTCATGAA
AAGATAGAAC AGCTCACTCA GATGGCCTTG AAAGAGATGA TGAAAATCGG CGGAGTAGAA
ATCTACGGCC CACTCGACGA AAGACAGCAC GGGATAGTCT CGTTCAACGT AAAGGGAATA
CACCCGCACG ATGTGGCTCA CATTCTCGAT CAGGAGTTTG GAATAGCCGT AAGGAGTGGG
CACCACTGCG CACAGCCTCT GATGAGTATT TTGAAAGAAC AGTCGCAAAT CGATTTTCCA
AACTCCACCT GCAGAGCCAG TTTTTACATC TACAACACGG AAGAAGATGT TAAAATTCTC
GTTGAAGGTG TGAAAAAAGT AAAGGAGTGG TTTTCAAGAT GA
 
Protein sequence
MLSTGLYEDF PTLKMKINGK RIVYLDSAAT TLKPKQVVKK LEEFYYNSYA NVHRAVHTLA 
VRATTELEET REEFAEFLGV FPQEIIFTSG TTMAINLVVM SLLRSGILKK DDLVLVSLLE
HHANFVPWLR LSKLHGYRID FIKPSGRFGT LEMDDLLKHR DKNPKVVAIT GLSNVTGQRI
PVEELRNVFP NSIILLDGAQ LIPHEPVKPK EIGVDFLAFS LHKMLGPTGV GVLYGKRELM
EQMEPFLYGG EMIDRVSLED VTFNELPYKF EAGTPNIADI VASREALRYL KETGFDSVHE
KIEQLTQMAL KEMMKIGGVE IYGPLDERQH GIVSFNVKGI HPHDVAHILD QEFGIAVRSG
HHCAQPLMSI LKEQSQIDFP NSTCRASFYI YNTEEDVKIL VEGVKKVKEW FSR