| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1428 |
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| Symbol | |
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| ID | 6092870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 1439329 |
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| End bp | 1440249 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642488630 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001739455 |
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| Protein GI | 170289217 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.137055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAGAT ACAGAGTGCA CGTGAACGAT CCTCTCGATA AAGAGGCAAC ACAGCTTCTT
ATGAACAAAG AGGAACTCGA AGTCACATCG GAACACCTAG AAAAAGACGA ATTGATGAAG
ATCATACCGG AAGTCGATGT TCTTGTCGTC AGAAGCGCCA CTAAAGTCAC AGCCGACATC
ATAGAGGCCG GGAAAAATCT GAAGATCATC GCCAGGGCAG GCATCGGGCT GGACAACATA
GACGTTCAAA AGGCCAAGGA AAAAGGAATA AAAGTGCTCA ACACACCAGG TGCTAGTGCT
CCATCCGTGG CAGAACTCGC GATGGGTTTG ATGCTTGCTT GTGCTCGCCA CATAGCAAGA
GCTACCATAT CTCTCAAAGA AGGAAAATGG GAGAAGAAAG CACTCAAAGG AAAGGAACTT
CTTGGAAAAA CGCTGGGACT CATCGGATTT GGAAACATTG GGCAGGAAGT GGCAAAAAGA
GCCCTTGCCT TTGGAATGAA AATCATCGCT TACGATCCCG CGAAACCCGA AACAGATCTA
CCTGTTGAAT ACGTGGATCT GGACACTCTT TTCAAAGAAA GCGACTTCAT TTCCCTGCAT
GTGCCTCTCA CAGAATCAAC CAGGCATATC ATAAACAGAG AGAGTATCGC GAAGATGAAA
GACGGTGTCA TCATAGTAAA CACAGCCCGT GGGGGAACAA TCGACGAAGA AGCCCTGTAC
GAAGCCCTTG TGAGTGGAAA AGTTTACGCT GCAGGGCTCG ACGTCTTCGA AGTGGAACCA
CCAACAGATG AAATCAGAAG GAAACTTTTG AGCTTGGACA ACGTTGTCGC CACTCCCCAC
ATAGGTGCCT CTACAGATGA AGCTCAGAAT AGAGTTGGAA TAGAACTCGT GGAAAAGATT
TTCAAGGAAC TGGGAATTTG A
|
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| Protein sequence | MARYRVHVND PLDKEATQLL MNKEELEVTS EHLEKDELMK IIPEVDVLVV RSATKVTADI
IEAGKNLKII ARAGIGLDNI DVQKAKEKGI KVLNTPGASA PSVAELAMGL MLACARHIAR
ATISLKEGKW EKKALKGKEL LGKTLGLIGF GNIGQEVAKR ALAFGMKIIA YDPAKPETDL
PVEYVDLDTL FKESDFISLH VPLTESTRHI INRESIAKMK DGVIIVNTAR GGTIDEEALY
EALVSGKVYA AGLDVFEVEP PTDEIRRKLL SLDNVVATPH IGASTDEAQN RVGIELVEKI
FKELGI
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