| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1399 |
|---|
| Symbol | rpsL |
|---|
| ID | 6092841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1409737 |
|---|
| End bp | 1410120 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642488601 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_001739426 |
|---|
| Protein GI | 170289188 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000381794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACGA TCAATCAATT AATCAGGTAC GGCAGGAAAC CGAAGAAGAA AAAGTCAAAA
GCTCCTGCTC TTCAGGGAAA CCCTCAAAAG AGGGGTGTGT GTATAAAAGT TTCTACGATG
ACACCGAAAA AACCGAACTC CGCTCTCAGA AAGATCGCAA GGGTGAGGCT TTCAAATGGA
ATAGAAGTCA CTGCGTATAT TCCTGGAATT GGTCACAACC TGCAGGAACA CTCTGTTGTG
CTCGTCAGAG GTGGTAGGGT CAAGGACCTA CCTGGTGTCA GGTACAAGAT CATCAGAGGG
GCTCTGGACG CTGCAGGCGT CGAGGGAAGA AGACAGTCCA GAAGTAAGTA CGGTGCGAAA
AGACCCAAGG ATCAGAAGAA GTGA
|
|---|
| Protein sequence | MPTINQLIRY GRKPKKKKSK APALQGNPQK RGVCIKVSTM TPKKPNSALR KIARVRLSNG
IEVTAYIPGI GHNLQEHSVV LVRGGRVKDL PGVRYKIIRG ALDAAGVEGR RQSRSKYGAK
RPKDQKK
|
|---|
| |