| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1395 |
|---|
| Symbol | rpsJ |
|---|
| ID | 6092837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1405592 |
|---|
| End bp | 1405900 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642488597 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_001739422 |
|---|
| Protein GI | 170289184 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00721101 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGAC AGAAGATAAG GATAAAACTC AAAGCCTACG ATCACGAGTT ACTCGACGAA
TCGGCGAAAA AGATCGTTGA AGTCGCTAAA TCCACGAATT CCAAAGTGTC CGGTCCCATT
CCCTTGCCAA CGGAGCGGAC ACTCTATTGT GTCCTGAGAT CTCCCATGAA ACACAAGGAC
TCCAGAGAAC ACTTTGAAAA GAGAGTACAC AAAAGGCTAA TAGATATCAT AGACCCATCT
CCAAAGACCA TCGATGCTTT GATGAGGATA AACCTCCCAG CAGGTGTCGA CGTTGAGATC
AAACTGTAA
|
|---|
| Protein sequence | MPGQKIRIKL KAYDHELLDE SAKKIVEVAK STNSKVSGPI PLPTERTLYC VLRSPMKHKD
SREHFEKRVH KRLIDIIDPS PKTIDALMRI NLPAGVDVEI KL
|
|---|
| |