Gene TRQ2_1379 details

Gene Information

• Locus tag: TRQ2_1379
• Symbol: rplF
• ID: 6092821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 1398254
• End bp: 1398808
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 642488581
• Product: 50S ribosomal protein L6
• Protein accession: YP_001739406
• Protein GI: 170289168
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0181894
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGAC TCGCGAAAAA GCCCATAGTC TTACCACAGG GTGTTACGGT TGAAATAAAA 
GACAACGTTG TTAAGGTGAA GGGACCCAAG GGAGAACTCA GTCAGGAATT TCTCCCTTAC 
GTGAAAATAG AAGTTGAAGG TAATGAAGTC TGGGTAAGAC CCAACGAGAA TCAGATTATA 
AGAAAATCTG ACTGGAGAAA GATAAAGATG TTCCAGGGAA CTTACTGGTC CCTCATCAGA 
AATATGGTTG TTGGTGTAAC AGAAGGCTAC AAGAAAGAGC TGGAAATCGT AGGAATCGGT 
TACAGGGCTC AGCTTCAGGG GAATACAGTA GTGATGAACC TTGGTTACGC TCATCCCGTT 
GTTTACGAGA TACCCTCTGA TGTGAAAATT GAAGTTCCTG CACCGAACAG GATAGTTGTT 
TCTGGCATCG ATAAACAGAG GGTTGGACAG GTTGCCGCTG AGATCAGAGC GTTCAGACCA 
CCAAATGTCT ACACCGGAAA GGGAATCAGG TATGTTGGTG AAGTGGTGAG ACAGAAAGAA 
GGTAAGAAAG CATAA 

 

Protein sequence

MSRLAKKPIV LPQGVTVEIK DNVVKVKGPK GELSQEFLPY VKIEVEGNEV WVRPNENQII 
RKSDWRKIKM FQGTYWSLIR NMVVGVTEGY KKELEIVGIG YRAQLQGNTV VMNLGYAHPV 
VYEIPSDVKI EVPAPNRIVV SGIDKQRVGQ VAAEIRAFRP PNVYTGKGIR YVGEVVRQKE 
GKKA