| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1283 |
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| Symbol | |
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| ID | 6092724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 1309605 |
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| End bp | 1312286 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642488484 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001739310 |
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| Protein GI | 170289072 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAGAC TATTTCTCTT TGATGGAACT GCTCTGGCCT ACAGAGCGTA CTATGCGCTC
GATAGATCGC TTTCTACTTC CACCGGCATT CCCACAAACG CCACATACGG TGTGGCGAGG
ATGCTGGTGA GATTCATCAA AGACCATATC ATTGTCGGAA AAGACTACGT TGCTGTGGCT
TTCGACAAAA AAGCTGCCAC CTTCAGACAC AAGCTCCTCG AGACTTACAA GGCTCAAAGA
CCTAAGACGC CGGATCTCCT GATTCAGCAG CTTCCGTACA TAAAGAAGCT GGTCGAAGCA
CTTGGAATGA AGGTGCTGGA GGTAGAAGGA TACGAAGCGG ACGATATAAT TGCCACTCTG
GCTGTGAAGG GGCTTCCGCT CTTTGATGAA ATATTCATAG TGACCGGAGA TAAAGACATG
CTTCAGCTTG TGAACGAAAA GATCAAGGTG TGGCGAATCG TAAAAGGGAT ATCCGATCTG
GAACTTTACG ATGCGCAGAA GGTGAAGGAA AAATACGGTG TTGAACCCCA GCAGATCCCG
GATCTTCTGG CTCTAACCGG AGATGAAATA GACAACATCC CCGGTGTAAC TGGGATAGGT
GAAAAGACTG CTGTTCAGCT TCTAGAGAAG TACAAAGACC TCGAAGACAT ACTGAATCAT
GTTCGCGAAC TTCCTCAAAA GGTGAGAAAA GCCCTGCTTC GAGACAGAGA AAACGCCATT
CTCAGCAAAA AGCTGGCGAT TCTGGAAACA AACGTTCCCA TTGAAATAAA CTGGGAAGAA
CTCCGCTACC AGGGTTACGA CAGAGAAAAA CTCTTACCAC TTTTGAAAGA ACTGGAATTC
GCATCCATCA TGAAGGAACT TCAACTGTAC GAGGAATCCG AACCCGTTGG ATACAGAATA
GTGAAAGACC TGGTGGAATT TGAAAAACTC ATAGAGAAAC TGAGAGAATC CCCTTCGTTC
GCCATAGATC TTGAGACGTC TTCCCTCGAT CCTTTCGACT GCGACATTGT CGGTATCTCT
GTGTCTTTCA AACCAAAGGA AGCGTACTAC ATACCACTCC ATCATAGAAA CGCCCAGAAC
CTGGATGAAA AAGAAGTTCT GAAAAAGCTA AAAGAAATCC TGGAGGACCC CGGAGCAAAG
ATCGTTGGTC AGAATTTGAA ATTCGATTAC AAGGTGTTGA TGGTAAAGGG TGTTGAACCT
GTCCCTCCTC ACTTCGACAC GATGATAGCG GCTTACCTTC TTGAGCCGAA CGAAAAGAAG
TTCAATCTGG ACGATCTCGC ATTGAAATTT CTTGGATACA AAATGACCTC TTACCAGGAA
CTCATGTCCT TCTCTTCTCC GCTGTTTGGT TTCAGTTTTG CCGATGTTCC TGTAGAAAAA
GCAGCGAACT ATTCCTGTGA AGATGCAGAC ATCACCTACA GACTCTACAA GATCCTGAGC
TTAAAACTCC ACGAGGCAGA TCTGGAGAAC GTGTTCTACA AGATAGAAAT GCCTCTTGTG
AGCGTGCTTG CACGGATGGA ACTGAACGGT GTGTACGTGG ACACAGAGTT CCTGAAGAAA
CTCTCAGAAG AGTACGGAAA AAAACTCGAA GAACTGGCAG AGGAAATATA CAGGATAGCT
GGAGAGCCGT TCAACATAAA CTCACCGAAG CAGGTTTCAA GGATCCTTTT TGAAAAACTC
GGCATAAAAC CACGTGGTAA AACGACGAAA ACGGGAGACT ACTCAACACG CATAGAAGTC
CTCGAGGAAC TTGCCGGTGA ACACGAAATC ATTCCTCTGA TTCTCGAATA CAGAAAGATA
CAGAAATTGA AATCAACCTA CATAGACGCC CTCCCCAAGA TGGTCAACCC AAAGACCGGA
AGAATTCATG CTTCTTTCAA TCAAACGGGG ACTGCCACTG GAAGACTCAG CAGCAGCGAT
CCCAACCTTC AGAACCTCCC GACGAAAAGC GAAGAGGGAA AAGAAATCAG GAAAGCGATA
GTTCCTCAGG ATCCAAACTG GTGGATCGTC AGCGCCGACT ACTCCCAGAT AGAACTGAGG
ATCCTCGCCC ATCTCAGCGG TGATGAGAAT CTTTTGAAAG CATTCGAAGA GGGCATCGAC
GTCCACACTC TAACAGCTTC CAGAATATTC AACGTGAAAC CCGAAGAAGT AACCGAAGAA
ATGCGCCGCG CCGGTAAAAT GGTGAATTTT TCCATCATAT ACGGAGTAAC ACCTTACGGT
CTGTCTGTGA GGCTTGGAGT ACCTGTGAAA GAAGCAGAAA AGATGATCGT CAACTACTTC
GTCCTCTACC CAAAGGTGCG CGATTACATT CAGAGGGTCG TATCGGAAGC GAAAGAAAAA
GGCTATGTTA GAACGCTGTT TGGAAGAAAA AGAGACATAC CACAGCTCAT GGCCAGGGAC
AGAAACACAC AAGCTGAAGG AGAACGAATT GCCATAAACA CTCCCATACA GGGTACAGCA
GCGGATATAA TAAAGCTGGC TATGATAGAA ATAGACAGGG AGCTGAAAGA AAGAAAAATG
AGATCGAAGA TGATCATACA GGTCCACGAC GAACTGGTTT TTGAAGTGCC CGATGAGGAA
AAGGACGCGC TCGTCGAGCT GGTGAAAGAC AGAATGACGA ATGTGGTAAA GCTTTCAGTG
CCGCTCGAAG TGGATGTAAC CATCGGCAAA ACATGGTCGT GA
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| Protein sequence | MARLFLFDGT ALAYRAYYAL DRSLSTSTGI PTNATYGVAR MLVRFIKDHI IVGKDYVAVA
FDKKAATFRH KLLETYKAQR PKTPDLLIQQ LPYIKKLVEA LGMKVLEVEG YEADDIIATL
AVKGLPLFDE IFIVTGDKDM LQLVNEKIKV WRIVKGISDL ELYDAQKVKE KYGVEPQQIP
DLLALTGDEI DNIPGVTGIG EKTAVQLLEK YKDLEDILNH VRELPQKVRK ALLRDRENAI
LSKKLAILET NVPIEINWEE LRYQGYDREK LLPLLKELEF ASIMKELQLY EESEPVGYRI
VKDLVEFEKL IEKLRESPSF AIDLETSSLD PFDCDIVGIS VSFKPKEAYY IPLHHRNAQN
LDEKEVLKKL KEILEDPGAK IVGQNLKFDY KVLMVKGVEP VPPHFDTMIA AYLLEPNEKK
FNLDDLALKF LGYKMTSYQE LMSFSSPLFG FSFADVPVEK AANYSCEDAD ITYRLYKILS
LKLHEADLEN VFYKIEMPLV SVLARMELNG VYVDTEFLKK LSEEYGKKLE ELAEEIYRIA
GEPFNINSPK QVSRILFEKL GIKPRGKTTK TGDYSTRIEV LEELAGEHEI IPLILEYRKI
QKLKSTYIDA LPKMVNPKTG RIHASFNQTG TATGRLSSSD PNLQNLPTKS EEGKEIRKAI
VPQDPNWWIV SADYSQIELR ILAHLSGDEN LLKAFEEGID VHTLTASRIF NVKPEEVTEE
MRRAGKMVNF SIIYGVTPYG LSVRLGVPVK EAEKMIVNYF VLYPKVRDYI QRVVSEAKEK
GYVRTLFGRK RDIPQLMARD RNTQAEGERI AINTPIQGTA ADIIKLAMIE IDRELKERKM
RSKMIIQVHD ELVFEVPDEE KDALVELVKD RMTNVVKLSV PLEVDVTIGK TWS
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