Gene TRQ2_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1273 
Symbol 
ID6092714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1302616 
End bp1304022 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content50% 
IMG OID642488474 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_001739300 
Protein GI170289062 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGG GTTCGAAAGG ATTCATTGTG AGTATTATGG GACCTGTTGT GGACGTGAAA 
TTTCCCGAAG AGGAACTCCC GGATATATAC AACGCCCTCG AAGTTGTAAA TCCCCAAACG
GGGCAGAAGG TAGTGCTCGA GGTGGAGCAG CTCATCGGCG ATGGAGTTGT TAGAACGGTG
GCTATGGATT CAACAGACGG TTTAACCAAA GGTCTGGAAG TGGTAGATAC AGGAGCTCCC
ATAACAGCAC CTGTGGGGAA AGAAGTCCTT GGAAGGATCC TGAACGTGAT AGGTGAACCT
GTCGACGAAG CAGGAGAAAT AAAAGCCAAA GAAAGATGGC CCATTCACAG ACCAGCCCCT
GAGCTTGTGG AACAATCCAC AGAGATAGAA ATCCTCGAGA CCGGTATAAA GGTGATCGAT
CTTCTCGCTC CGTTCCCAAA GGGCGGAAAG ATCGGTTTCT TCGGAGGAGC GGGCGTTGGA
AAGACCGTGC TCGTTATGGA ACTCATCAGA AACATCGCAA TAGAACACAA GGGATTTTCA
GTGTTCGCAG GTGTCGGGGA GAGAACAAGA GAAGGTAACG AACTCTGGCT CGAAATGCAG
GAAAGCGGAG TTCTTGGAAA CACCGTTCTC GTTTTTGGCC AGATGAACGA GCCCCCGGGA
GCAAGGTTCA GAGTGGCTCT TACCGCCCTC ACCATCGCTG AGTACTTCAG AGACGTAGAA
GGAAGAGACG TTCTTCTCTT CATAGACAAC ATATTCAGGT TTGTCCAAGC TGGAAGTGAA
GTCTCGGCAC TTCTCGGAAG AATGCCGTCT GCTGTGGGAT ATCAGCCCAC CCTCGCAACC
GATATGGGAG AACTTCAGGA GAGAATCACT TCGACGAGGA GAGGTTCCAT CACATCCGTT
CAGGCCATAT ACGTTCCTGC GGACGACATA ACCGACCCGG CACCGGCAAC CACCTTCGCC
CATCTTGATG CCACTGTGGT TCTGTCACGA AGAATAGCAG AACTTGGACT TTACCCGGCG
GTTGATCCTC TCGACTCCTC CTCGAAAATT CTGGATCCAG CGATCGTTGG AAGAGAGCAT
TACGAAGTGG CAAGAGGTGT TCAGGAAGTT CTTCAGAGAT ACAAGGACCT TCAGGATATT
ATCGCCATAC TCGGTGTGGA GGAACTCTCT CCGGAAGACA AACTTGTGGT TCACCGTGCC
AGAAGAATTC AAAGGTTCCT CAGCCAGCCG TTCCACGTAG CAGAAAGGTT CACAGGTCGT
CCTGGAAGAT ACGTACCCAT TGAAGAAACA ATTAGAGGAT TCAAGGAGAT TCTCGACGGA
AAACTCGACG ATGTACCTGA ACAGGCGTTT CTCATGGCCG GAAACATCGA CGAAGTTAAA
GAAAGAGCAA AAGAAATGAG GAGTTGA
 
Protein sequence
MAKGSKGFIV SIMGPVVDVK FPEEELPDIY NALEVVNPQT GQKVVLEVEQ LIGDGVVRTV 
AMDSTDGLTK GLEVVDTGAP ITAPVGKEVL GRILNVIGEP VDEAGEIKAK ERWPIHRPAP
ELVEQSTEIE ILETGIKVID LLAPFPKGGK IGFFGGAGVG KTVLVMELIR NIAIEHKGFS
VFAGVGERTR EGNELWLEMQ ESGVLGNTVL VFGQMNEPPG ARFRVALTAL TIAEYFRDVE
GRDVLLFIDN IFRFVQAGSE VSALLGRMPS AVGYQPTLAT DMGELQERIT STRRGSITSV
QAIYVPADDI TDPAPATTFA HLDATVVLSR RIAELGLYPA VDPLDSSSKI LDPAIVGREH
YEVARGVQEV LQRYKDLQDI IAILGVEELS PEDKLVVHRA RRIQRFLSQP FHVAERFTGR
PGRYVPIEET IRGFKEILDG KLDDVPEQAF LMAGNIDEVK ERAKEMRS