| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1257 |
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| Symbol | |
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| ID | 6092698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 1286467 |
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| End bp | 1290078 |
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| Gene Length | 3612 bp |
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| Protein Length | 1203 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642488458 |
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| Product | TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase |
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| Protein accession | YP_001739284 |
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| Protein GI | 170289046 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTGA AAAAATTTCT GAGAGAGACG TACTGGGGGG ATGAATTTCT CATAGAAGAT
GACGGTGAAG ATCAAGTTTT GAAAATCGTA AAAGCCTCCG TGGATAGATC TTTCTTCTTC
AACGAATACG CGAAATTGAA ACGGCTCAGG CTGCCAAACG TTCTTCTGCC TGAAAGGTTG
AAAATCTCTG ATGGGAAGTT CCTGCTGTTC TATCCCTACT ACCACAACCT CGCACCTCTC
GAAAATCTGA GCGATCAGGT CGCAAAGCAG CTTCTCAAGC TGTTTCTCTT TCTCTCGAAA
GTGGGCGTCA CTATTCCCGC GCTCGGGATG GACGACATAC TGGTGAACGA CGGAGTTTTT
TTGATCCCTG CACTCATCTC GAACATTCCG GACGATGTGA AGGGCGTTGT TTTTTCTCCA
GAGAGATCTT CCCGGGCAAC CGAAGAAGTG TGCAGGCGTT TTTTGAAAAT CCACGGAATA
GAACCTCATC TGGAGACCAG AGAGCCCTCG TTCGACTCCA GAGAGATCAG AATTCCCTAC
ATTCACAGGA AAGAAGAAGA ACTGATAAAA AGAGACATAG AAACTTCCCA AAAATTTCCT
CTCTTCATTC TGATCACAGG TGAACAGAGG GTGGGAAAAA CGAAACTCGC GTCTGTTCTG
GTCGATGAAT TGAGAGAAAG AGGATATATG ATTCACCAGA TCTCATCTCT TGAAGATCTC
CGTGTATGGT ACGATGCTTC AGACGAACTC GATCTTCTCA CCAAACTCGA CGACGGTCAA
AAAAAGGTGA TCTTGATCGA CGACTTGTTT GAAGGTTCAG ACTTGTTATC GTTTCTCGAG
GAGTTTTCCG GACTCTCCAC TATCACCAAA ATAATCGTTC TAACAACTTC TACAAAGGCT
TTTCAATTCT TCCACAAGGT GTACAGGCTC TCTCCTTTCA CAGTTGAGGA AACTCGTATC
TTTCTTGAGA GAGCGATTGG AAAAATCAGC GACGATCAAG TTAAGTTGAT TCACAGTCTC
AGCAAGGGAT TACCGGGATA CATGGTAGAA TTGTTGAAAT TCTTCAACAA ATCCAATCTC
AGAGAAAACA TCGTTGGAAT CTTCAAACCT CTTCTTCGAG AGCTGGATTC CGCAGAAATC
AGAGAACTGA GCGTTCTGGG GCAGAAGTTC ACCGGAAGCG AATTGAGGGT TCTTGAAAAG
ATAACCGGAA AAGACTACCA TGACACTTTG ATGTCCGCAT ATGATTCTGG TGTGATAACG
ACAGAAGAAG GACTCTACAG ATTCGCACTT AGAGAATTCT GGAAATACTA CTACAACAAG
CTTTCAGAGA ACAAAAAGAA AAATCTCCAC GAAAAACTGT TCGAAAATCT CCCGGACGAC
CTCGCAATAA AACACGCCCT GTCTCTGGAG GACCCAAGAT TAAAGTTTTT CTACGTGCTG
AGATACGTGA GAAAGCACTT CTGGGATTAT GAAAAGACCA GATCGCTCAT TGAATACCTG
AGAAGACTGG AGGAATTTTT TGAAAAACCC TATTATTCCA TAGAAAGCTT GAAGATGAAG
CTTATTTTCA GAATAGATCC TCTGGGTGTA GAAAAGGAGA ATTTTCATTT TCGCAGATTC
AAAACCCTCA GAGAAATAGA TGTTGAATCG ATCTTGCAAA AAGACTCACT GTCTTATTAT
GATCTATACA ATCTCGTCGT TCTTTCCCGT TTTCACATAA GAGCGGGAAA GAAAGCCCCT
CAGGAAATTC TCAACACCAT CAAAAGAGAG CTCAAAGAGA AAAACTTCTC CACAAGAGAA
AGGCTTTATC TGAAGGCTCA TCTTCTCTAC GATCTCTTTT CTTCAACTGA AGATCGGGAA
GCACTGAAAG AGATGATGAA CATTGCCACC TCGGAAGGTT TCCTCGACCT TCAAGTGATG
GGTTACAGAG CTTTGGGAGT TCTTTCAAGA ACGAGAGCGA TGAGCAACTA CTACTTCCAT
CACTCTTTAG AGCTTTCAAG AAAAATAGAC CCATCACTTT CCATCGTGGA CGAAAGCAAT
TTGACATGGA GCTTGCTCTA CGAGGGAAAA ATAACGAACT TCCTCGTCCA GCTTGAAAGA
CTGAGAAAAC AGGCAAGGCT CTTTGAAGAC ATGCCCATCC TTTCTTACAC CTACTTTCTC
GAAGGGCTCT ACTACATCCA CAAGAAAGAT TTCCAAAAAG CAGAAGAAGT CTTCAGAACA
GAACTCGAAC TGGAAGAAAA ACACGGAATA GAAAGAAGAG CACTCAGAGG ACTGGTCATG
AACTACCTGT TTTCTGGAGA CGTTGAATCC GCTAAAAGTC TTCTGGAAAA GGATGAACCC
GAGTTCGATA GATTCGGATT CAATTTTCTC AAGAGGCTGG TCCTTGCAAA AGACGATTCA
GAGCTCTTGA AAATCTGGAA AGAAAGGCTT GAAACTCCTC AGAAATTCTT CAACGAAGAA
ATCGCTTATG TTTTTACAGA AAGGTTAGCA AAACTGGATC CAGAAGGCTT TGAAGATTTT
CTGCTCGAAC TTGAAAGGGA AAATGTCGAA AATTCTTCAA ATCTCACACT CGCTCTGGTT
TATGAAACCT TTTACAAATT CTACAGTGCC CTTGGAGAAA ACTTCAAAGC CAAGCGTTAT
CTCAGAAAGG CGATTTTTGT TTACAACCTG ATAGGTTTGA GAGAAGTTTC GGTCAAGCTG
GAGGTGGAAG AAAAAACTCA AATTGAAGAG AAAAAAGCAC CGTTTTATCT ATTGCTGGGT
TTCATAGAAA CAGAAAAGGA ATTTTCCGAT ATGATGGAGT TTGTTGCAGC AAGGCTTTCA
GAAGTAATTC CATACGAAGT TTTTTCAATT CGAATAATTG AGAGAACAAC GAAAAAGGTG
ATGGAAGAAT ATTCAACATC TCCAATCACT CCACCTATGG AGAAGGACTT CCTCGAAATT
TCACCCTTCA GAACGGTCAT GTCCTTCCAT CTCGATATGA AGCACGACAT GATCGTTGGT
GTTGAGACCA ACCTTGAATG TGACGAAAAA ACAGCCTGGG AACTGGTGGA AACGCTCGAA
CAATTTGGAA ACATTCTCAC CACCATTCTC AGAGAACGTC TCTACAGAGA CAGAAGTATG
AAAGATCCTC TCACGGGAGT TCTGTCCAGG TGGTACTTCA TGGAACGTCT TGAGGAAGAG
GCGTACAAAT CTTCGAGGTA TAAATCTCCC CTTTCCATCA TTATGTGCGA TGCCGATGAC
TTCAAAAAGA TAAACGATCA ATTTGGACAC GTTGCGGGTG ACAAAACTCT CGGCTGGCTG
GGAAGAAAGA TGAAGTCCGT TTTGAGAAAG AGCGATCTTG TGGGAAGATA CGGAGGGGAA
GAGTTCATTA TAGCTCTCCC GGGAACTTCC CTGGAAGAGG CAAAGATTGT AGCAGAGAAG
CTGAGAAAGG CCGTTATGGA AGATCCAGAG AACACTTATC ACATCACTCT GAGTTTTGGA
GTGGCAGAAT ACAAAAACGG CGAGGACCCC TTTGAAACAA TAAAAAGGGC CGATGAGGCC
CTCTACCTGG CAAAAACTCT TGGAAAGAAC TCTGTGGTCA CAGAGAAAGT ACTTTCTCGA
CGATCTTCTT GA
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| Protein sequence | MRVKKFLRET YWGDEFLIED DGEDQVLKIV KASVDRSFFF NEYAKLKRLR LPNVLLPERL
KISDGKFLLF YPYYHNLAPL ENLSDQVAKQ LLKLFLFLSK VGVTIPALGM DDILVNDGVF
LIPALISNIP DDVKGVVFSP ERSSRATEEV CRRFLKIHGI EPHLETREPS FDSREIRIPY
IHRKEEELIK RDIETSQKFP LFILITGEQR VGKTKLASVL VDELRERGYM IHQISSLEDL
RVWYDASDEL DLLTKLDDGQ KKVILIDDLF EGSDLLSFLE EFSGLSTITK IIVLTTSTKA
FQFFHKVYRL SPFTVEETRI FLERAIGKIS DDQVKLIHSL SKGLPGYMVE LLKFFNKSNL
RENIVGIFKP LLRELDSAEI RELSVLGQKF TGSELRVLEK ITGKDYHDTL MSAYDSGVIT
TEEGLYRFAL REFWKYYYNK LSENKKKNLH EKLFENLPDD LAIKHALSLE DPRLKFFYVL
RYVRKHFWDY EKTRSLIEYL RRLEEFFEKP YYSIESLKMK LIFRIDPLGV EKENFHFRRF
KTLREIDVES ILQKDSLSYY DLYNLVVLSR FHIRAGKKAP QEILNTIKRE LKEKNFSTRE
RLYLKAHLLY DLFSSTEDRE ALKEMMNIAT SEGFLDLQVM GYRALGVLSR TRAMSNYYFH
HSLELSRKID PSLSIVDESN LTWSLLYEGK ITNFLVQLER LRKQARLFED MPILSYTYFL
EGLYYIHKKD FQKAEEVFRT ELELEEKHGI ERRALRGLVM NYLFSGDVES AKSLLEKDEP
EFDRFGFNFL KRLVLAKDDS ELLKIWKERL ETPQKFFNEE IAYVFTERLA KLDPEGFEDF
LLELERENVE NSSNLTLALV YETFYKFYSA LGENFKAKRY LRKAIFVYNL IGLREVSVKL
EVEEKTQIEE KKAPFYLLLG FIETEKEFSD MMEFVAARLS EVIPYEVFSI RIIERTTKKV
MEEYSTSPIT PPMEKDFLEI SPFRTVMSFH LDMKHDMIVG VETNLECDEK TAWELVETLE
QFGNILTTIL RERLYRDRSM KDPLTGVLSR WYFMERLEEE AYKSSRYKSP LSIIMCDADD
FKKINDQFGH VAGDKTLGWL GRKMKSVLRK SDLVGRYGGE EFIIALPGTS LEEAKIVAEK
LRKAVMEDPE NTYHITLSFG VAEYKNGEDP FETIKRADEA LYLAKTLGKN SVVTEKVLSR
RSS
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