| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1232 |
|---|
| Symbol | trmD |
|---|
| ID | 6092668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1261223 |
|---|
| End bp | 1261960 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642488428 |
|---|
| Product | tRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_001739259 |
|---|
| Protein GI | 170289021 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000175059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCA CAATAGTGAC TATATTCCCT GAAATGGTCG AAGTTATAAA GAAGTACGGC
GTCATAGCTC GGGCGGTAGA AAGAGGTATC GTGGAGATAA ACGTGGAGAA TTTGAGGGAT
TACACCACCG ACAGGCACAG AACGGTTGAC GATTATCAAT ACGGCGGCGG ATACGGCATG
GTGATGAAAC CTGAACCTTT CTTCAGATTC TACGAAAGTT ACGTAGAAAA ATATGGAAAA
CCTTACGTTA TTCTCACAAG TCCGCAGGGG AGAATTTTCA ACTACAAGAT AGCAGAAGAA
CTTTCAAAGA AGGACGACAT CGTTATATTC TGTGGAAGGT ACGAGGGAAT AGATGAAAGA
GTGATGAGCA TCGTTGACGA TGAAATATCC ATAGGAGACT ACATACTCAC GGGTGGAGAG
CTCCCCGCCA TGGTCATAAC TGACGCTGTT GTGAGGCTTG TACCGGGTGT TGTCGAGAGA
GAATCCGTAG AAAGAGAATC GTTTCATCAG GGACTACTCG ATCATCCCGT TTACACAAGG
CCGTATGAGT ACAAGGGTAT GAAAGTTCCA GATGTTCTCC TCTCTGGAGA CCACGAAAAG
GTGGAGCTCT GGAGAAGAAA GGAGAGCATA AAGAAAACAC TGGCAAAGAG GCCAGATCTT
TTCTTAGCGA AGGAACTGGA CGAAATGGAC AAATTGGCTA TAATAGAGTT GTTCAGGGAG
TTGATGGAAA AATGTTAG
|
|---|
| Protein sequence | MRITIVTIFP EMVEVIKKYG VIARAVERGI VEINVENLRD YTTDRHRTVD DYQYGGGYGM
VMKPEPFFRF YESYVEKYGK PYVILTSPQG RIFNYKIAEE LSKKDDIVIF CGRYEGIDER
VMSIVDDEIS IGDYILTGGE LPAMVITDAV VRLVPGVVER ESVERESFHQ GLLDHPVYTR
PYEYKGMKVP DVLLSGDHEK VELWRRKESI KKTLAKRPDL FLAKELDEMD KLAIIELFRE
LMEKC
|
|---|
| |