Gene TRQ2_1220 details

Gene Information

• Locus tag: TRQ2_1220
• Symbol: radC
• ID: 6092656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 1253213
• End bp: 1253860
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642488416
• Product: DNA repair protein RadC
• Protein accession: YP_001739247
• Protein GI: 170289009
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTTCCAA GAGAGAGGAT GATAAAGGCG GGGCCAGAGT CGCTTTCGGT TGAAGAACTC 
GTCGCCATAG TGTTGAGAAC TGGAAAGAAG GGAAAACACG TTCTCGAACT TTCAAAGGAT 
CTTCTTGAAA GGTTTGACGG CTCGTTGATA AAACTCTCGA ACGCAAGTCT CGAGGAGATA 
GCTTCGGTCG AAGGGGTCGG TATGGTCAAG GCCATCACCT TGAAAGCTGC TCTGGAGCTT 
GGAAAAAGAC TTCACAGAGA ACTGGAAAGG ATACCGGAGA AGCTGGACTC TTCCGTGAAA 
GTTTACAAAT ACTGCCAGGA AATGGTGTAT CTTGAGAGGG AAATTGTGAA GGTGATCTGT 
CTCGATACGA AGCTCAACGT TATAGGAGAA AACACACTCA CTGTTGGAAC TTCTGACAGG 
AGTTTGATAC ATCCGCGGGA CGTGTTTCGG ACGGCTATCA GGGCTAATGC ATCTGGAGTG 
ATCGTCGTTC ACAACCATCC TTCTGGTGAT CCCACTCCCA GCAAAGAAGA TCGTTTGATC 
ACGGAAAGAT TGAAACAAGC AGGAGAAATC CTTGGGGTGA GTCTTGTGGA TCACGTCATT 
GTATCGAGAC GAGGATATTT CAGCTTCAGG GAGGAGGGAG AACTTTGA 

 

Protein sequence

MLPRERMIKA GPESLSVEEL VAIVLRTGKK GKHVLELSKD LLERFDGSLI KLSNASLEEI 
ASVEGVGMVK AITLKAALEL GKRLHRELER IPEKLDSSVK VYKYCQEMVY LEREIVKVIC 
LDTKLNVIGE NTLTVGTSDR SLIHPRDVFR TAIRANASGV IVVHNHPSGD PTPSKEDRLI 
TERLKQAGEI LGVSLVDHVI VSRRGYFSFR EEGEL