| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1178 |
|---|
| Symbol | |
|---|
| ID | 6092613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1214896 |
|---|
| End bp | 1216947 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642488373 |
|---|
| Product | translation elongation factor G |
|---|
| Protein accession | YP_001739205 |
|---|
| Protein GI | 170288967 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.747201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGAC TTCAGAATGT GCGTTCGGCT ACTTTGATAG GACACAACGG ATCGGGTAAA
TCTCTCCTTC TCGCGCAGAT TCTTTACAAA TCAGGTCTGA TTGACAAAGC AGATACAAAG
TACGTGGATT ACGATCCTGT AGAAGAGGAA AAAGGAGCCA GTTTCTCCTC ACACGTGGCG
TCCCTTGAAT GGAAAGGCAA AAAGGTGTAT CTGATAGATA CCCCTGGATT CTCGGATTTC
ATATCGGAGG TTATAAACGG GATTTTCGTT TCTGAAAACA TCATCTCCGT GGTGAACGCC
GTTGCCGGTG TGGAAATACA GACCGAAAGA ACATGGAACA TGGCGGATGA GATGAAAAAA
CCCATCATGG TTTTCGTCAA CCAGATGGAT AAAGAGAGGG CCAATTTTGA GAATGTGGTG
GCAGAACTGA AAGAGAGGTT CTCCAGAAAG ATCGTCCCGG TGGTTGTTCC AATCGGTGCG
GCTGAAAACT TCGAAGGTGT CGTGGATCTT TTGAAGAAAA AAGTCTACAG GTACGATGGA
GATAAAGTTC AGGAAGAAGA CATGCCGGAG AATTTCAACG ATATGAGATC AGAGATTCTC
GAAGATATCG TGGAACAGGA TGAAGAGTTG ATGATGAGGT ATCTCGACGG TGAAGAGATC
GGATACGATG AGCTCATGAG GGTACTCAGG GAGAGTTACA AAAAGGGAGA AATCGTGCCT
GTACTTTCGG GATCCGCGTT GAAAGGAATA GGATTGGATC TTCTTCTCGA TTATCTGGGA
GACATAGGCG TTTCTCCCGA GGAAGCTCCT TCGTACAAGG CGCTCCTGGA GGATGGAACG
GAGATAGAAG TGAAGTTCTC TGAAGAAGAG CCGTTCTGTG CTTACATTTT CAAATCCGTG
GTTGACCAGT TCGTTGGAAG AATCACCTTT GCTAAAGTTA TCGCAGGAGT TCTCAGATCT
GGTGACACCA TTGTGAATGT TCAGAAGGAT GTCTCGGAGA AATTAGGGCA CATTTATGTT
CCAATTCTCA AACAGCAGAA GGAAGTTGAA TCCGCTGGTC CCGGTGAGAT CGTTGTTCTT
CTGAAGCTCA AAGAAGGTGC TGTTGGAGAA ACACTCGCAC ACAGAGATAG AAGGGTGAAG
ATAGTGCCTC CTGCTTTCCC GGAACCCATG TTCTCCAGGT CTGTTCATCC AAAATCGAAG
TCCGATATCG ACAAGATCAG CAATGGACTT TCGAGACTTT CAGATTCCGA TCCAACGTTC
GTGTGGGAAT ACGATTCTGA AACAGGAGAA ACCGTCGTTT CCGGTCTTGG TGCGATGCAC
CTTGACGTCA TGATAGAGAG ATTGAAGAAG ATCTTCGGTG TCGATGTGGA AGTTGGAAAG
CCGAAGATCG CCTACAGAGA GACGATCACG ACAACCGCTG TTGCCGAACA CAAGCACAAG
AAACAGACTG GTGGACACGG TCAGTACGGT CACGTGAAGA TACAGCTGGA GCCTCTTCCA
AGGGGACAAG GATACGAATT CGTTGACAAG ATCGTTGGCG GAGTGATCCC GAGAAACTTC
ATACCATCTG TCGATAAGGG TATCAGAGAA GCCATGAAGA AAGGAGTTCT GGCAGGATAC
CCTGTGACAG ATGTCAGAGT CATACTCTTT GATGGTTCTT ACCATGAAGT GGACTCTTCG
GACATCTCGT TCCAGATAGC CGCCATTCAG GCCTTCAAAA AAGGAATGGA AGCGGCAAAA
CCCGTCATCC TGGAACCCAT AATGGAGGTT GAGGTCTTCG TTCCGGAAGA GAACGCAGGA
GACGTGATGG GAGAGATCTC CAGTAGAAGG GGAAGACCCC TCGGAATGGA GCCGTCTGGA
AAAGGCATGG TAAAGGTGAA AGCGGAAGTC CCACTCGCTG AGATGCTCGA CTTTTCCAGC
AAACTTTCTT CCATCACAAG CGGTAGAGGA TACTTCACAA TGAGGTTCCA GAGGTACGAA
ATAGTGCCTC CGAACATACA GGAGAAGATC ATCGAAGAGA GAAGAAGAGA GATGCAGGAA
CAGGAGAAGT GA
|
|---|
| Protein sequence | MGGLQNVRSA TLIGHNGSGK SLLLAQILYK SGLIDKADTK YVDYDPVEEE KGASFSSHVA
SLEWKGKKVY LIDTPGFSDF ISEVINGIFV SENIISVVNA VAGVEIQTER TWNMADEMKK
PIMVFVNQMD KERANFENVV AELKERFSRK IVPVVVPIGA AENFEGVVDL LKKKVYRYDG
DKVQEEDMPE NFNDMRSEIL EDIVEQDEEL MMRYLDGEEI GYDELMRVLR ESYKKGEIVP
VLSGSALKGI GLDLLLDYLG DIGVSPEEAP SYKALLEDGT EIEVKFSEEE PFCAYIFKSV
VDQFVGRITF AKVIAGVLRS GDTIVNVQKD VSEKLGHIYV PILKQQKEVE SAGPGEIVVL
LKLKEGAVGE TLAHRDRRVK IVPPAFPEPM FSRSVHPKSK SDIDKISNGL SRLSDSDPTF
VWEYDSETGE TVVSGLGAMH LDVMIERLKK IFGVDVEVGK PKIAYRETIT TTAVAEHKHK
KQTGGHGQYG HVKIQLEPLP RGQGYEFVDK IVGGVIPRNF IPSVDKGIRE AMKKGVLAGY
PVTDVRVILF DGSYHEVDSS DISFQIAAIQ AFKKGMEAAK PVILEPIMEV EVFVPEENAG
DVMGEISSRR GRPLGMEPSG KGMVKVKAEV PLAEMLDFSS KLSSITSGRG YFTMRFQRYE
IVPPNIQEKI IEERRREMQE QEK
|
|---|
| |