| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1166 |
|---|
| Symbol | |
|---|
| ID | 6092601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1204317 |
|---|
| End bp | 1205096 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642488361 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001739193 |
|---|
| Protein GI | 170288955 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00292656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAA CGCTGAATAG CGTTTCCTTC AGATACAACG GAGACTACGT TTTGAAGGAC
GTGAACGCCG AGTTCGAAAC GGGGAAGATC TACGTTGTGG TGGGAAAAAA CGGCTCCGGG
AAGACCACCC TTTTGAAGAT CCTCGCAGGA CTCCTGGAAG CCGAGGGAGA GATTTTCCTG
GACGGTTCAC CAGCGGATCC GTTTCTTTTG AGAAAGAACG TGGGCTACGT CTTCCAGAAT
CCGTCTTCAC AGATCATAGG TGCCACCGTG GAGGAGGACG TGGCCTTTTC GCTGGAGATA
CTGGGGCTCG ACGAGGGCGA AATGAGAAAG AGAATAAAGA AGGTCCTGGA ACTGGTGGGA
CTCTCCGGTC TCGAAAAGGA AGACCCGCTG AGCCTTTCAG GAGGACAGAA ACAGAGACTT
GCAATCGCCT CGATGCTCGC TCGAGACACA CACTTTCTCG CTTTAGATGA GCCGGTTTCC
ATGCTGGACC CTCCCTCTCA GAGGGAGATA TTTCAGGTGC TCGAGAGCCT CAAGAATGAA
GGAAAGGGAA TAATACTGGT AACACACGAG CTGGAGTATC TGGATGATAT GGACTTCATA
CTCCACATCT CGAATGGTAC AATCGATTTC TGTGGAAGCT GGGAGGAATT CGTGGAGAGA
GAGTTCGACG ATGTGGAGAT TCCTTTCAAG TGGAAACTCT GGAAGAAATG TGGGAAGATA
AACCTGTGGG AGGATCGGTA TGAGAATTCT GGTAACCAAC GACGACGGGA TACAGTCTAA
|
|---|
| Protein sequence | MKITLNSVSF RYNGDYVLKD VNAEFETGKI YVVVGKNGSG KTTLLKILAG LLEAEGEIFL
DGSPADPFLL RKNVGYVFQN PSSQIIGATV EEDVAFSLEI LGLDEGEMRK RIKKVLELVG
LSGLEKEDPL SLSGGQKQRL AIASMLARDT HFLALDEPVS MLDPPSQREI FQVLESLKNE
GKGIILVTHE LEYLDDMDFI LHISNGTIDF CGSWEEFVER EFDDVEIPFK WKLWKKCGKI
NLWEDRYENS GNQRRRDTV
|
|---|
| |