Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0971 |
Symbol | |
ID | 6092401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1008986 |
End bp | 1009867 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642488167 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001739004 |
Protein GI | 170288766 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0994152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA GAAGTGGTTG GACAGCGTTC TGGATGATTT TGCCGACAAT TCTTGTCATA TCCGTAGTGG CTTTTTTTCC TCTGTTCAAA ACCTTCTACG ACAGTTTCTA CAGTTTCGGT TTGAGGCCCG GTATAGAGAG AAGATTCGTT GGGCTTCAGA ACTATTTCAG ACTCTTTGAG GACACCCGCT TCATAATGGC TTTGAAAAAC ACCGTCTTTT TCACGGTGAT TTCGGTTTCT CTGGAGACGG TGCTTGGTGT TCTCATCGCC ATAGTTGTTC ATCAGAGATT CGCGTTGAGA GGCGTTGTGA GGGCCGCTAT GCTCGTTCCA TGGGCAATTC CAACGGCCAT TTCTTCTCAA ATGTGGCGAT GGATGTTCCA CGATCAATTC GGAATAATGT CGAGACTCTG GGAGAAACTC GGAATAATAG AACCGGGAAC CCCCATTCTC GGAACACCAG GGCTCGCCAT GTGGGCGATC ATATTCGTTG ATGTGTGGAA AACGACTCCG TTCATGGCTC TTTTGATTCT CGCAGGTCTT CAGGTGATAC CGGAGGATAT TTACGAAGCG GCGAGAATCG ACGGAGCAAA TACAATTCAA AGATTCTTCA GAATCACTCT TCCGTTGATA ACGCCAACGA TAGGAGTGGC TCTGATCTTC AGGACACTCG ATGCACTGCG CGTGTTCGAT GTTGTCTACA TCATGACGAG AGGTGCTGTG AACACAGAAA CCCTGGCCGT TTACAACCGA CACGTTCTGA TGGATAGGGC TTTCACCGGC GCGTGGTTTG GATACGGTTC CGCCATATCT GTTTTCATAT TCGTTCTTAT ATCGATCTTT GCCATACTTT ACATAAAGTC CTTGAGGCTG AAACTCGATT GA
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Protein sequence | MEKRSGWTAF WMILPTILVI SVVAFFPLFK TFYDSFYSFG LRPGIERRFV GLQNYFRLFE DTRFIMALKN TVFFTVISVS LETVLGVLIA IVVHQRFALR GVVRAAMLVP WAIPTAISSQ MWRWMFHDQF GIMSRLWEKL GIIEPGTPIL GTPGLAMWAI IFVDVWKTTP FMALLILAGL QVIPEDIYEA ARIDGANTIQ RFFRITLPLI TPTIGVALIF RTLDALRVFD VVYIMTRGAV NTETLAVYNR HVLMDRAFTG AWFGYGSAIS VFIFVLISIF AILYIKSLRL KLD
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