Gene TRQ2_0959 details

Gene Information

• Locus tag: TRQ2_0959
• ID: 6092389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 993765
• End bp: 994328
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642488156
• Product: 2'-5' RNA ligase
• Protein accession: YP_001738993
• Protein GI: 170288755
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1514] 2'-5' RNA ligase
• TIGRFAM ID: [TIGR02258] 2'-5' RNA ligase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000732376
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAACCT TCATTGCTAT CGATGTCAAC GAAGAAGTCA AGAAGCAAGC CTCTGAGATC 
ATAGAAAAAC TCATGAAAAG AGGCTTTGGT GCAACGTGGG TTTCTGAAGA AAACATGCAC 
CTCACGCTTT TTTTCCTGGG AGAGGTTGAC GAGCAGAAAA TCTCCGAAAT AGCCGAACAC 
CTCTGTAGAA GAGTGAGAGG TTTTCCTTCT TTTTCGTTCA CCGTGAAAGG TTTTGGGTAC 
TTCAAGAGGA AGATGTCTCC GCGCGTCTTT TGGCTCGGAG TGGAGAACAC CGATCGCTTG 
ATGAAACTCT ACGAAGAGCT CAGAAACGAG CTGTCTCACC ACGGTTTCTC GTTTGAAGAG 
AAGTTCGTTC CTCACATTAC AATTGGAAGG GTGAAGTACT ACCCGGACAA GTGGGAAAAA 
CTGATCGAAG ACATCGATTT TCCGCCCATC GAAGTTGCGG TGGACAGATT CAAGATTTAC 
TCGTCCACGT TAACACCGAC AGGTCCCATC TACAAAGTTC TCTACGAATG TCAGTTTGAA 
GGAGGATTGA TCAGGTATGC CTGA 

 

Protein sequence

MRTFIAIDVN EEVKKQASEI IEKLMKRGFG ATWVSEENMH LTLFFLGEVD EQKISEIAEH 
LCRRVRGFPS FSFTVKGFGY FKRKMSPRVF WLGVENTDRL MKLYEELRNE LSHHGFSFEE 
KFVPHITIGR VKYYPDKWEK LIEDIDFPPI EVAVDRFKIY SSTLTPTGPI YKVLYECQFE 
GGLIRYA