Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0940 |
Symbol | |
ID | 6092370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 972476 |
End bp | 974428 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642488137 |
Product | DNA helicase |
Protein accession | YP_001738974 |
Protein GI | 170288736 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | [TIGR00376] DNA helicase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.686303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGTTC AGCAGTTCAT AAAGAAGCTT GTGAGGCTCG TAGAACTTGA AAGGAACGCA GAAATAAACG CAATGTTCGA TGAGATGAAG CGGCTCTCGG GGGAGGAAAG AGAGAAAAAG GGTCGTGCCG TTCTGGGTCT CACAGGAAAA TTTATAGGAG AAGAACTTGG ATATTTCCTT GTGAGGTTTG GAAGAAGAAA GAAGATAGAC ACAGAAATCG GTGTGGGTGA TCTTGTTCTC ATAAGCAAAG GAAACCCCCT CAAGAGTGAT TACACGGGAA CGGTTGTAGA GAAAGGAGAG CGTTTCATCA CGGTAGCGGT CGATAGGCTT CCATCGTGGA AACTCAAAAA TGTGAGGATA GACCTCTTTG CGAGCGACAT CACGTTCAGA AGACAGATAG AGAACTTGAT GACGCTTTCT CCAGAAGGGA AAAAAGCCCT TGAGTTTCTC CTTGGAAAGA GAAAGCCAGA AGAGTCGTTT GAAGAAGAGT TCACTCCCTT CGATGAAGGA TTGAACGAGA GTCAGAGGGA AGCGGTTTCC CTTGCCCTCG GAAGTTCTGA TTTCTTTCTC ATACACGGCC CCTTCGGCAC GGGAAAGACC AGAACACTCG TGGAGTACAT AAGACAGGAA GTAGCACGTG GAAAGAAAAT TCTGGTCACA GCGGAGAGTA ACCTTGCTGT GGACAACCTC GTGGAGAGGC TCTGGGGGAA AGTGTCTCTG GTGAGAATTG GCCATCCTTC GCGCGTGTCC TCTCATCTGA AGGAGTCCAC ACTCGCACAT CAAATCGAAA CAAGCAGTGA GTACGAGAAA GTAAAAAAGA TGAAGGAAGA ACTCGCAAAG TTGATCGAAA AAAGGGACAG CTTCACAAAA CCTTCACCGC AGTGGAGAAG GGGGCTCAGC GACAAGAAGA TCCTGGAGTA CGCGGAGAAG AACTGGAGTG CCAGGGGAGT TTCCAAGGAA AAGATAAAGG AGATGGCAGA GTGGATAAAG TTAAACAGCC AGATTCAAGA TATTAGGGAC CTCATAGAAC GCAAAGAGGA AATAATAGCG AACAGGATAG TACGGGAAGC GCAGGTTGTG CTTTCAACCA ATTCATCCGC AGCTCTGGAA ATAATATCGG GAATAGTCTT CGATGTGGTA GTTGTTGACG AGGCCTCTCA GGCAACTATC CCAAGCATCC TCATTCCCAT ATCGAAAGGC AAAAAGTTCG TCCTCGCTGG GGATCACAAA CAGCTTCCAC CCACGATACT CTCGGAAGAC GCGAAGGACC TTTCGAGAAC ACTGTTTGAA GAACTCATAA CTCGATATCC CGAGAAGTCT TCTCTTCTCG ATACCCAGTA CAGAATGAAC GAACTTTTGA TGGCGTTTCC GAGTGAAGAA TTTTACGACG GAAAACTGAA AGCGGCCGAG GAAGTCAGAA ACATAACGCT CTTCGACCTT GGAGTGGAGA TACCGAACTT TGGAAAGTTC TGGGATGTTG TTCTCTCCCC AAAAAACGTT CTGGTCTTCA TAGACACAAA GAACAGATCT GACAGATTTG AAAGGCAAAG GAAAGACTCT CCCTCGAGAG AGAATCCATT AGAAGCACAG ATCGTGAAAG AGGTTGTGGA AAAGCTTCTC TCCATGGGGG TGAAGGAGGA TTGGATCGGG ATCATCACTC CCTACGATGA TCAGGTGAAT CTCATAAGAG AGTTGATCGA AGCGAAAGTA GAAGTACACA GTGTGGATGG TTTTCAGGGA AGGGAAAAAG AGGTCATCAT CATCTCATTT GTGCGTTCGA ACAAAAACGG TGAAATAGGG TTCCTCGAAG ATCTGAGAAG ACTCAACGTC TCACTCACAC GGGCGAAAAG AAAACTGATA GCAACGGGAG ATTCGAGCAC GCTCTCTGTC CATCCAACTT ACAGAAGGTT CGTAGAGTTC GTGAAAAAGA AGGGAACTTA CGTGATCTTT TGA
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Protein sequence | MTVQQFIKKL VRLVELERNA EINAMFDEMK RLSGEEREKK GRAVLGLTGK FIGEELGYFL VRFGRRKKID TEIGVGDLVL ISKGNPLKSD YTGTVVEKGE RFITVAVDRL PSWKLKNVRI DLFASDITFR RQIENLMTLS PEGKKALEFL LGKRKPEESF EEEFTPFDEG LNESQREAVS LALGSSDFFL IHGPFGTGKT RTLVEYIRQE VARGKKILVT AESNLAVDNL VERLWGKVSL VRIGHPSRVS SHLKESTLAH QIETSSEYEK VKKMKEELAK LIEKRDSFTK PSPQWRRGLS DKKILEYAEK NWSARGVSKE KIKEMAEWIK LNSQIQDIRD LIERKEEIIA NRIVREAQVV LSTNSSAALE IISGIVFDVV VVDEASQATI PSILIPISKG KKFVLAGDHK QLPPTILSED AKDLSRTLFE ELITRYPEKS SLLDTQYRMN ELLMAFPSEE FYDGKLKAAE EVRNITLFDL GVEIPNFGKF WDVVLSPKNV LVFIDTKNRS DRFERQRKDS PSRENPLEAQ IVKEVVEKLL SMGVKEDWIG IITPYDDQVN LIRELIEAKV EVHSVDGFQG REKEVIIISF VRSNKNGEIG FLEDLRRLNV SLTRAKRKLI ATGDSSTLSV HPTYRRFVEF VKKKGTYVIF
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