Gene TRQ2_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0940 
Symbol 
ID6092370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp972476 
End bp974428 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content47% 
IMG OID642488137 
ProductDNA helicase 
Protein accessionYP_001738974 
Protein GI170288736 
COG category[L] Replication, recombination and repair 
COG ID[COG1112] Superfamily I DNA and RNA helicases and helicase subunits 
TIGRFAM ID[TIGR00376] DNA helicase, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.686303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTC AGCAGTTCAT AAAGAAGCTT GTGAGGCTCG TAGAACTTGA AAGGAACGCA 
GAAATAAACG CAATGTTCGA TGAGATGAAG CGGCTCTCGG GGGAGGAAAG AGAGAAAAAG
GGTCGTGCCG TTCTGGGTCT CACAGGAAAA TTTATAGGAG AAGAACTTGG ATATTTCCTT
GTGAGGTTTG GAAGAAGAAA GAAGATAGAC ACAGAAATCG GTGTGGGTGA TCTTGTTCTC
ATAAGCAAAG GAAACCCCCT CAAGAGTGAT TACACGGGAA CGGTTGTAGA GAAAGGAGAG
CGTTTCATCA CGGTAGCGGT CGATAGGCTT CCATCGTGGA AACTCAAAAA TGTGAGGATA
GACCTCTTTG CGAGCGACAT CACGTTCAGA AGACAGATAG AGAACTTGAT GACGCTTTCT
CCAGAAGGGA AAAAAGCCCT TGAGTTTCTC CTTGGAAAGA GAAAGCCAGA AGAGTCGTTT
GAAGAAGAGT TCACTCCCTT CGATGAAGGA TTGAACGAGA GTCAGAGGGA AGCGGTTTCC
CTTGCCCTCG GAAGTTCTGA TTTCTTTCTC ATACACGGCC CCTTCGGCAC GGGAAAGACC
AGAACACTCG TGGAGTACAT AAGACAGGAA GTAGCACGTG GAAAGAAAAT TCTGGTCACA
GCGGAGAGTA ACCTTGCTGT GGACAACCTC GTGGAGAGGC TCTGGGGGAA AGTGTCTCTG
GTGAGAATTG GCCATCCTTC GCGCGTGTCC TCTCATCTGA AGGAGTCCAC ACTCGCACAT
CAAATCGAAA CAAGCAGTGA GTACGAGAAA GTAAAAAAGA TGAAGGAAGA ACTCGCAAAG
TTGATCGAAA AAAGGGACAG CTTCACAAAA CCTTCACCGC AGTGGAGAAG GGGGCTCAGC
GACAAGAAGA TCCTGGAGTA CGCGGAGAAG AACTGGAGTG CCAGGGGAGT TTCCAAGGAA
AAGATAAAGG AGATGGCAGA GTGGATAAAG TTAAACAGCC AGATTCAAGA TATTAGGGAC
CTCATAGAAC GCAAAGAGGA AATAATAGCG AACAGGATAG TACGGGAAGC GCAGGTTGTG
CTTTCAACCA ATTCATCCGC AGCTCTGGAA ATAATATCGG GAATAGTCTT CGATGTGGTA
GTTGTTGACG AGGCCTCTCA GGCAACTATC CCAAGCATCC TCATTCCCAT ATCGAAAGGC
AAAAAGTTCG TCCTCGCTGG GGATCACAAA CAGCTTCCAC CCACGATACT CTCGGAAGAC
GCGAAGGACC TTTCGAGAAC ACTGTTTGAA GAACTCATAA CTCGATATCC CGAGAAGTCT
TCTCTTCTCG ATACCCAGTA CAGAATGAAC GAACTTTTGA TGGCGTTTCC GAGTGAAGAA
TTTTACGACG GAAAACTGAA AGCGGCCGAG GAAGTCAGAA ACATAACGCT CTTCGACCTT
GGAGTGGAGA TACCGAACTT TGGAAAGTTC TGGGATGTTG TTCTCTCCCC AAAAAACGTT
CTGGTCTTCA TAGACACAAA GAACAGATCT GACAGATTTG AAAGGCAAAG GAAAGACTCT
CCCTCGAGAG AGAATCCATT AGAAGCACAG ATCGTGAAAG AGGTTGTGGA AAAGCTTCTC
TCCATGGGGG TGAAGGAGGA TTGGATCGGG ATCATCACTC CCTACGATGA TCAGGTGAAT
CTCATAAGAG AGTTGATCGA AGCGAAAGTA GAAGTACACA GTGTGGATGG TTTTCAGGGA
AGGGAAAAAG AGGTCATCAT CATCTCATTT GTGCGTTCGA ACAAAAACGG TGAAATAGGG
TTCCTCGAAG ATCTGAGAAG ACTCAACGTC TCACTCACAC GGGCGAAAAG AAAACTGATA
GCAACGGGAG ATTCGAGCAC GCTCTCTGTC CATCCAACTT ACAGAAGGTT CGTAGAGTTC
GTGAAAAAGA AGGGAACTTA CGTGATCTTT TGA
 
Protein sequence
MTVQQFIKKL VRLVELERNA EINAMFDEMK RLSGEEREKK GRAVLGLTGK FIGEELGYFL 
VRFGRRKKID TEIGVGDLVL ISKGNPLKSD YTGTVVEKGE RFITVAVDRL PSWKLKNVRI
DLFASDITFR RQIENLMTLS PEGKKALEFL LGKRKPEESF EEEFTPFDEG LNESQREAVS
LALGSSDFFL IHGPFGTGKT RTLVEYIRQE VARGKKILVT AESNLAVDNL VERLWGKVSL
VRIGHPSRVS SHLKESTLAH QIETSSEYEK VKKMKEELAK LIEKRDSFTK PSPQWRRGLS
DKKILEYAEK NWSARGVSKE KIKEMAEWIK LNSQIQDIRD LIERKEEIIA NRIVREAQVV
LSTNSSAALE IISGIVFDVV VVDEASQATI PSILIPISKG KKFVLAGDHK QLPPTILSED
AKDLSRTLFE ELITRYPEKS SLLDTQYRMN ELLMAFPSEE FYDGKLKAAE EVRNITLFDL
GVEIPNFGKF WDVVLSPKNV LVFIDTKNRS DRFERQRKDS PSRENPLEAQ IVKEVVEKLL
SMGVKEDWIG IITPYDDQVN LIRELIEAKV EVHSVDGFQG REKEVIIISF VRSNKNGEIG
FLEDLRRLNV SLTRAKRKLI ATGDSSTLSV HPTYRRFVEF VKKKGTYVIF