Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0642 |
Symbol | |
ID | 6092059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 650881 |
End bp | 651651 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642487828 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001738678 |
Protein GI | 170288440 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000291189 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGCGG AAGAAAGAAG AAATCGAATA GCACAGATCA TAAAAAGTGG AAAAAGTGTG AGAGTTTCGG AACTTGCAAA GCTTTTTGAG GTATCTGAGT CTACCATCAG AAGAGATCTC AGAGAACTTG AGAATCTGGG GATATTAAAG AGAACACATG GAGGAGCCAT TGATAGTTCC CTCACATCTT TTGAACTTTC TTTTGATGAA AAAGAAGAAA AATTTAAGAA GGAGAAAGAG TGCATTGGAA AGATAGCCGC TTCTTTCGTG AGAGATGGCG ATACCATAAT TTTGGATGCA GGGACAACAA CAAAATACAT TGCTCAGAAC ATAGTAGCTA AAAATGTGAC CATAATAACA AATTCTGTAA ATATAGCGAA TGATTTATCC AATAACGATA ACTTTGAAGT GATTGTAACA GGAGGGATCA TAAGGACGAA AACCAAAGCA CTTGTTGGGG ATATTGCACA GATGGTTCTC AGACAGTTTA GAGTTGACAA AGCCTTTATT GGTGCGAACG GTGTATCTAT AAAATATGGA GTAACAACTC CTAGTCTTAT CGAAGCAATG ATAAAAAGAA CCATGATAGA AATATCTAAA GAAAGATTTT TAGTCGTTGA TAGTTCAAAA TTTGACCAGG TGACTTTTTC TTTCATATGT TCTGTAGAAG ACTTAGACTA TATCATCACT GATAGTATTT CAGAAGATCA AAAACGTGAG TATGAAAAGC TAGGAATAAA TATTATCACA GGGAAGGTGA TGACGGATTG A
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Protein sequence | MFAEERRNRI AQIIKSGKSV RVSELAKLFE VSESTIRRDL RELENLGILK RTHGGAIDSS LTSFELSFDE KEEKFKKEKE CIGKIAASFV RDGDTIILDA GTTTKYIAQN IVAKNVTIIT NSVNIANDLS NNDNFEVIVT GGIIRTKTKA LVGDIAQMVL RQFRVDKAFI GANGVSIKYG VTTPSLIEAM IKRTMIEISK ERFLVVDSSK FDQVTFSFIC SVEDLDYIIT DSISEDQKRE YEKLGINIIT GKVMTD
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