| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0568 |
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| Symbol | |
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| ID | 6091984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 574271 |
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| End bp | 575596 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642487754 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001738605 |
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| Protein GI | 170288367 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.489897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGCT ATCAGATCTA CGTGAGATCT TTCAGGGATG GAAACCTCGA CGGTGTGGGA
GATTTCAGGG GATTGAAAAA CGCTGTTTCC TACCTGAAAG AACTGGGGAT TGACTTTGTC
TGGCTCATGC CTGTTTTTTC CTCCATATCT TTTCACGGGT ACGACGTGGT GGATTTTTAT
TCTTTCAAAG CTGAGTACGG TAGCGTGAGA GAGTTCAAAG AGATGCTCGA GGCGTTCCAC
GACAGCGGAA TAAAAGTCGT TCTTGACCTT CCCATCCATC ACACAGGCTT TCTCCACACG
TGGTTCCAGA AGGCGCTGAA AGGAGATCCA CACTACAGAG ATTACTACGT ATGGGCAAAC
AAAGAGACGG ATCTGGACGA GAGAAGAGAG TGGGATGGAG AAAAGATCTG GCATCCCCTG
GAAGATGGAA GGTTCTACAG AGGACTCTTT GGACCTTTTT CACCCGATTT GAACTACGAC
AACCCACAGG TATTCGATGA AATGAAAAAG CTGGTTCTCC ACCTTCTTGA TATGGGAGTG
GATGGTTTCA GGTTCGACGC AGCAAAGCAC ATGAGGGACA CGATCGAACA GAACGTTCGC
TTCTGGAAGT ACTTTCTTTC CGATTTGAAG GGCATCTTCC TCGCGGAAAT ATGGGCAGAG
GCCAGAATGG TGGATGAACA CGGCAGAATA TTTGGCTACA TGCTCAACTT TGACACATCC
CACTGTATAA AGGAAGCTGT ATGGAAAGAG AACACAAGAG TTCTGATAGA GTCGATCGAA
AGGGCCGTTG TCGGCAAAGA CTACCTCCCG GTGAATTTTA CTTCGAATCA CGACATGTCA
AGGCTTGCAA GCTTTGAAGG AGGCTTCAGC AAAGAAAAGA TCAAACTTTC GATTTCCATT
CTTTTCACTC TCCCGGGAGT TCCTCTCGTG TTCTATGGGG ATGAGCTTGG AATGAAAGGA
ATTTACCAGA AACCGAACAC AGAAGTCGTT CTGGATCCGT TTCCGTGGAA TGAGAGTATG
TGCGTTGAGG GACAGACCTT CTGGAAGTGG CCCGCGTACA ACGGGCCTTT CTCTGGTGTC
TCTGTGGAAT ACCAGAAGAA AGATCCCGAT TCGATTCTTT CACACACGCT GGGATGGACG
AGATTCAGAA AGGAAAACCA GTGGATCGAT CGGGCAAAGC TCGAATTTTT GTGCAAAGAG
GACAAGTTCC TTGTGTACAG ACTCTACGAT GATCAGCATT CTTTGAAGGT GTTTCACAAT
CTTTCAGGGG AAGAGGTTGT CTTTGAGGGA GTTAAAATGA AGCCTTACAA AACGGAGGTG
GTTTGA
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| Protein sequence | MIGYQIYVRS FRDGNLDGVG DFRGLKNAVS YLKELGIDFV WLMPVFSSIS FHGYDVVDFY
SFKAEYGSVR EFKEMLEAFH DSGIKVVLDL PIHHTGFLHT WFQKALKGDP HYRDYYVWAN
KETDLDERRE WDGEKIWHPL EDGRFYRGLF GPFSPDLNYD NPQVFDEMKK LVLHLLDMGV
DGFRFDAAKH MRDTIEQNVR FWKYFLSDLK GIFLAEIWAE ARMVDEHGRI FGYMLNFDTS
HCIKEAVWKE NTRVLIESIE RAVVGKDYLP VNFTSNHDMS RLASFEGGFS KEKIKLSISI
LFTLPGVPLV FYGDELGMKG IYQKPNTEVV LDPFPWNESM CVEGQTFWKW PAYNGPFSGV
SVEYQKKDPD SILSHTLGWT RFRKENQWID RAKLEFLCKE DKFLVYRLYD DQHSLKVFHN
LSGEEVVFEG VKMKPYKTEV V
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