Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0393 |
Symbol | |
ID | 6091798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 383218 |
End bp | 383952 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642487571 |
Product | ABC transporter related |
Protein accession | YP_001738432 |
Protein GI | 170288194 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGGCAG TGGTTGTAAA GGATCTGAAA AGAAAGATTG GAAAGAAAGA GATCCTGAAA GGAATTTCTT TTGAGATCGA AGAAGGAGAG ATCTTTGGTC TCATAGGACC GAACGGTGCG GGAAAGACCA CAACACTCAG GATCATCTCC ACGCTGATCA AGCCTTCCTC CGGAATCGTC ACCGTATTTG GAAAGAACGT TGTTGAAGAA CCACACGAAG TGAGAAAGCT GATCAGCTAC CTTCCCGAAG AAGCGGGTGC CTACAGAAAC ATGAGGGGAA TCGAATATCT GAGATTCGTC GCGGGTTTCT ACGCTTCCAG TTCAAGCGAG ATAGAAGAGA TGGTCGAACG GGCAACGGAG ATCGCCGGTC TCGGTGAAAA GATAAAAGAC AGAATCTTAA CCTACAGCAA AGGTATGGTG AGAAAACTCC TCATAGCGAG GGCTTTGATG GTGAATCCTC GTCTCGCCAT CCTCGACGAA CCCACCTCCG GCCTCGATGT CCTCAACGCA AGAGAAGTGA GAAAGATATT GAAACAGGCA TCTCAGGAAG GTCTCACCAT ACTGGTCTCT TCTCACAACA TGCTCGAAGT GGAATTCCTC TGTGATCGAA TAGCGCTGAT TCACAACGGA ATGATCGTGG AAACAGGAAC CGTTGAAGAA CTCAAGGAAA GGTACAAAGC ACAGAACATC GAAGAGGTCT TCGAGGAGGT GGTGAAATGT TCGGAAGACT CCTGA
|
Protein sequence | MGAVVVKDLK RKIGKKEILK GISFEIEEGE IFGLIGPNGA GKTTTLRIIS TLIKPSSGIV TVFGKNVVEE PHEVRKLISY LPEEAGAYRN MRGIEYLRFV AGFYASSSSE IEEMVERATE IAGLGEKIKD RILTYSKGMV RKLLIARALM VNPRLAILDE PTSGLDVLNA REVRKILKQA SQEGLTILVS SHNMLEVEFL CDRIALIHNG MIVETGTVEE LKERYKAQNI EEVFEEVVKC SEDS
|
| |