Gene TRQ2_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0393 
Symbol 
ID6091798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp383218 
End bp383952 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content48% 
IMG OID642487571 
ProductABC transporter related 
Protein accessionYP_001738432 
Protein GI170288194 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGCAG TGGTTGTAAA GGATCTGAAA AGAAAGATTG GAAAGAAAGA GATCCTGAAA 
GGAATTTCTT TTGAGATCGA AGAAGGAGAG ATCTTTGGTC TCATAGGACC GAACGGTGCG
GGAAAGACCA CAACACTCAG GATCATCTCC ACGCTGATCA AGCCTTCCTC CGGAATCGTC
ACCGTATTTG GAAAGAACGT TGTTGAAGAA CCACACGAAG TGAGAAAGCT GATCAGCTAC
CTTCCCGAAG AAGCGGGTGC CTACAGAAAC ATGAGGGGAA TCGAATATCT GAGATTCGTC
GCGGGTTTCT ACGCTTCCAG TTCAAGCGAG ATAGAAGAGA TGGTCGAACG GGCAACGGAG
ATCGCCGGTC TCGGTGAAAA GATAAAAGAC AGAATCTTAA CCTACAGCAA AGGTATGGTG
AGAAAACTCC TCATAGCGAG GGCTTTGATG GTGAATCCTC GTCTCGCCAT CCTCGACGAA
CCCACCTCCG GCCTCGATGT CCTCAACGCA AGAGAAGTGA GAAAGATATT GAAACAGGCA
TCTCAGGAAG GTCTCACCAT ACTGGTCTCT TCTCACAACA TGCTCGAAGT GGAATTCCTC
TGTGATCGAA TAGCGCTGAT TCACAACGGA ATGATCGTGG AAACAGGAAC CGTTGAAGAA
CTCAAGGAAA GGTACAAAGC ACAGAACATC GAAGAGGTCT TCGAGGAGGT GGTGAAATGT
TCGGAAGACT CCTGA
 
Protein sequence
MGAVVVKDLK RKIGKKEILK GISFEIEEGE IFGLIGPNGA GKTTTLRIIS TLIKPSSGIV 
TVFGKNVVEE PHEVRKLISY LPEEAGAYRN MRGIEYLRFV AGFYASSSSE IEEMVERATE
IAGLGEKIKD RILTYSKGMV RKLLIARALM VNPRLAILDE PTSGLDVLNA REVRKILKQA
SQEGLTILVS SHNMLEVEFL CDRIALIHNG MIVETGTVEE LKERYKAQNI EEVFEEVVKC
SEDS