Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0352 |
Symbol | |
ID | 6091756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 335055 |
End bp | 335762 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642487529 |
Product | rhomboid family protein |
Protein accession | YP_001738391 |
Protein GI | 170288153 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAC GGGCTGTCTA TTTCATTCTG CTCTTCAACG CGTTCATATT CGTGATGATG ACCTTTTCTG GTGTTTTCTC GACCAGGGAT CCTGTTCTTC AGATGCTGCT TTTGTTGAGA TACGGAGCGC AGTACGGTCC CAGAGTCGAC GCGGGAGACT GGTTCAGGTT GATCACCGCT CTGTTCGTCC ACGGAGGAAT ACTCCACATA CTGTTCAATT CATACGCGCT TTACTACTTT GGCCTGATCG TGGAGGATAT ATACGGAACG GAGAAGTTCC TGGTCGGTTA TTTCTTCACC GGAATCGTGG GTAATCTGGC AACGCACGTG TTCTACCACG ACACAATCTC CGTCGGGGCT AGTGGTGCCA TCTTTGGCCT CATCGGAATA CTCTTCGCGG CGGGTTTTCG AAAGGACACA CCCTTCTTCA TGAAACCTGT GACCGGCATG TCGCTTCTTC CCATCATTCT GATCAACGTT GTGTACGGAT TTCTCCCGGG CACGAACATC AACAACGCGG CTCATCTTGG AGGTTTCCTG TCTGGAATGC TTCTTGGATA CACGATGAGA CCCTTCTCGT GGAAAAGGAG GACCCTCTGG AGGGTCCTCG CGATAGTCGT CGTTTCGCTC GTCGTTCTCT CTTACGTTTT CCTGATTAGA CAGATCCCGG AGATCGACGA AGCGATCAGA AGGTTCAAAG CAGGATGA
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Protein sequence | MRKRAVYFIL LFNAFIFVMM TFSGVFSTRD PVLQMLLLLR YGAQYGPRVD AGDWFRLITA LFVHGGILHI LFNSYALYYF GLIVEDIYGT EKFLVGYFFT GIVGNLATHV FYHDTISVGA SGAIFGLIGI LFAAGFRKDT PFFMKPVTGM SLLPIILINV VYGFLPGTNI NNAAHLGGFL SGMLLGYTMR PFSWKRRTLW RVLAIVVVSL VVLSYVFLIR QIPEIDEAIR RFKAG
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