| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0306 |
|---|
| Symbol | |
|---|
| ID | 6091710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 289168 |
|---|
| End bp | 290019 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642487485 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_001738347 |
|---|
| Protein GI | 170288109 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTC TTATAACAGG AGCGAATGGA CAACTTGGAA GAGCCTTTCA GGAACTGTTC
AAAAACGAGA AAGTTGAATT CATAGCAGCA CCGAAAGAAG AACTTGACAT AACAGATCTC
AGAAAGATCA GGGAATTTGT TTCAAAGAAC CCGGAAATAA CCCACATAAT CAACTGTGCT
GCTTACAACA AAGTGGACGA AGCTGAAAGA GACTGGAAAA CAGCGTACCT TGTCAACGGC
ATCGGCCCGA AAAATCTTGC GATAGTTTCA AACGAAATAG GTGCGGAACT CGTTCATTAT
TCAACGGATT ATGTCTTTTC AGGAAAGAAA GGATCTCCAT ACACGATATA CGACACTTCC
GATCCTATAA ACAAATATGG TGAGAGTAAG GTACTTGGAG AAAGATTCGT TATGAGCTTT
TCTAACAGAT ACTACCTCAT CAGAACGAGC TGGGTGTTCG GTGATGGTAT GAACTTTGTG
AGAAAAGTTT TGGAATGGAG CAAGAAAAGC AAAGTGCTGA GAATCGTAGA TGATGAAGTG
AGTTCCCCAA CGTACGCACC AGATCTTGCA AAAGCAACGT GGGAGTTGAT AAAACTCAAA
GCGTACGGAT TGTATCACAT AACGAACAGT GGCTATTGCT CTCGATATGA ATGGGCTGAG
TTCATTCTGA ACGAAATAGG GTGGGATGGA GAGCTCAAGA GAGCAAAGCA GGAAGATTTT
AATCTTCCCG CGAAAAGGCC TAAGTTTTCG GTGTTGGATG GGTTTGGATT GAGGGAATTT
ACTGGGATGA AGATGGAATC GTGGAAAAGG AGAACAACAG AATTTATCGA AAAATTAGGA
AGTGATTACT GA
|
|---|
| Protein sequence | MKVLITGANG QLGRAFQELF KNEKVEFIAA PKEELDITDL RKIREFVSKN PEITHIINCA
AYNKVDEAER DWKTAYLVNG IGPKNLAIVS NEIGAELVHY STDYVFSGKK GSPYTIYDTS
DPINKYGESK VLGERFVMSF SNRYYLIRTS WVFGDGMNFV RKVLEWSKKS KVLRIVDDEV
SSPTYAPDLA KATWELIKLK AYGLYHITNS GYCSRYEWAE FILNEIGWDG ELKRAKQEDF
NLPAKRPKFS VLDGFGLREF TGMKMESWKR RTTEFIEKLG SDY
|
|---|
| |