Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0256 |
Symbol | |
ID | 6091660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 244885 |
End bp | 245559 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642487436 |
Product | flagellar hook capping protein |
Protein accession | YP_001738298 |
Protein GI | 170288060 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCTACG ACATGAGCGG TATATACCTT TCTTCTCTTA CAGGAGTAAG AAATAATTCC AGCTCTTCGA GTAATTCTCT CGACAAGGAA GCTTTTCTCA GACTCCTTCT TCAAGAACTG GAAATGCAGG ATCCACTGGA GCCCATGGAA ACGAAGGACA TGATATCTCA GCTTTCTCAG CTCACGAGCC TTGAACAGAT CACAAACCTC ACCAGTGCGG TGAAAGATTT CGTCGAAGCT CAGACGAGTG TGAACCCAGC CCAGCTTGCT TCTCTGATAG GAAAGTACGT CGTGGTGAAG AACAACACGG TAAATCTTGT AGACGGTCAG TCAGACAGCA TCATATTCAA CGTGGATGAA GATGCACATG TTGTGGTTCA AATACTTGAC GAAAACGGAA AAGTGGTGAG AACAGAAGAT CTTGGAACTG TTCAGGCGGG AGTTCACGCC TGGCAGTGGG ATGGAAGAGA TGACAGCGGG ATCAGTGTTG AAGATGGCAG TTACACTTAC CATATTTATA AACTCACATC GAGCGGACTG GAGGAAATAG GGGGAATGGA AGGCGGAGTG GTGGAAGCCG TTCAGATAAA GGATGGAGAG GGATTCGTTC TTGTGAACGG TTCACTCTAT CCTGTTGATT CTATCCTGGA GATTTCTCAG GAGGGTGATG CGTGA
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Protein sequence | MIYDMSGIYL SSLTGVRNNS SSSSNSLDKE AFLRLLLQEL EMQDPLEPME TKDMISQLSQ LTSLEQITNL TSAVKDFVEA QTSVNPAQLA SLIGKYVVVK NNTVNLVDGQ SDSIIFNVDE DAHVVVQILD ENGKVVRTED LGTVQAGVHA WQWDGRDDSG ISVEDGSYTY HIYKLTSSGL EEIGGMEGGV VEAVQIKDGE GFVLVNGSLY PVDSILEISQ EGDA
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