| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0226 |
|---|
| Symbol | |
|---|
| ID | 6091630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 221248 |
|---|
| End bp | 223263 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642487407 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001738269 |
|---|
| Protein GI | 170288031 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.985632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAAG AATATCTCGG AGTGTTTGTC GATGAGACAA AAGAATACCT TCAAAATCTG
AACGATACCC TCCTCGAATT GGAGAAAAAT CCCGAAGATA TGGAACTCAT AAACGAAGCG
TTCAGGGCTC TTCATACCCT GAAAGGAATG GCAGGTACAA TGGGGTTTTC CAGTATGGCG
AAGCTCTGCC ATACCTTAGA AAACATCCTC GATAAAGCCA GAAACAGCGA GATAAAGATA
ACTTCCGATC TCCTCGATAA GATCTTCGCG GGGGTCGATA TGATAACCAG AATGGTTGAT
AAGATCGTCT CCGAGGGAAG TGACGACATC GGAGAAAACA TAGACGTGTT CTCCGACACC
ATAAAAAGCT TTGCATCATC GGGAAAAGAG AAGCCTTCAG AAATCAAAAA TGAAACGGAA
ACAAAGGGTG AGGAAGAACA CAAAGGAGAA TCAACAAGCA ATGAAGAAGT CGTAGTTCTT
CCTGAAGAAG TTGCCCACGT TCTTCAGGAA GCGAGAAACA AGGGTTTCAA AACGTTTTAT
ATTAAAGTGA TTCTCAAAGA AGGAACGCAG TTGAAATCCG CCAGGATTTA CCTCGTTTTC
CACAAGCTCG AGGAACTGAA GTGTGAAGTT GTGAGAACGA TTCCTTCGGT TGAAGAGATA
GAAGAAGAGA AATTCGAAAA CGAAGTGGAA CTCTTCGTAA TCTCCCCTGT GGATCTGGAG
AAACTCTCTG AAGCTCTGTC AAGCATCGCC GATATAGAGA GGGTAATAAT AAAAGAAGTA
ACCGCCGTCA CCGAAGAATC AGGGGCTGAG AAAAGAACCG AGAAAGAAGA GAAAACTAAA
AAAACTGAGG AAAAGACTGA AAGAAAAAAG GTTATTTCGC AAACAGTCAG GGTAGATATA
GAGAAACTGG ACAATTTGAT GGATTTGATG GGAGAACTGG TCATCGCAAG GAGCAGAATA
CTGGAAACGC TCAAGAAATA CAACATAAAA GAACTGGATG AGAGTTTGTC TCATCTCAGC
AGGATCACCT TAGACCTTCA GAATGTTGTG ATGAAGATCA GAATGGTTCC CATCTCCTTT
GTTTTCAACA GATTCCCTCG AATGGTGAGA GACCTTGCCA AAAAGATGAA CAAAGAAGTG
AATTTCATCA TGAGAGGAGA AGACACAGAG CTCGACAGAA CGTTCGTTGA AGAAATTGGC
GAACCCCTGC TCCATCTCCT GAGAAACGCC ATCGACCACG GTATAGAACC CAAAGAAGAA
CGAATAGCCA AAGGAAAACC CCCCATTGGA ACACTCATTC TCTCGGCACG TCACGAGGGA
AACAACGTGG TAATAGAAGT CGAAGATGAC GGAAGGGGTA TAGACAAGGA AAAGATCATC
AGAAAAGCCA TAGAAAAGGG ACTCATAGAT GAATCAAAGG CCGCTACCCT TTCTGATCAG
GAGATTCTGA ACTTCCTCTT CGTTCCGGGA TTCTCCACAA AGGAAAAAGT CTCAGAAGTC
TCCGGAAGAG GCGTGGGAAT GGATGTCGTG AAAAATGTGG TGGAATCTTT GAATGGTAGC
ATAAGCATAG AAAGCGAGAA AGATAAAGGA ACAAAAGTTA CGATAAGACT ACCGCTCACT
CTGGCCATCA TTCAGGCGCT CCTCGTCAAA GTCAACAATC TCGTCTACGC GATTCCGATA
GCGAACATAG ACACAATACT CAGCGTTTCA AAAGAGGATA TTCAAAGAGT TCAGGACAGA
GATGTGATAG TCATAAGAGG AGAAGTGATA CCCGTTTACC GCCTATGGGA AGTGCTTCAA
ATAGAGCACA AAGAAGAACT GGAGGAGATG GAAGCGGTTA TTGTGAGGGT AGGAAACAGG
AAGTACGGTA TCGTCGTAGA CGATCTTCTC GGTCAGGACG ATATCGTGAT AAAATCTCTT
GGAAAGGTGT TCTCTGAGGT GAAGGAATTC AGCGGAGCAG CTATTCTCGG TGATGGTAGT
ATAGCGCTGA TAATCAACGT CTCCGGCATT GTATAA
|
|---|
| Protein sequence | MMEEYLGVFV DETKEYLQNL NDTLLELEKN PEDMELINEA FRALHTLKGM AGTMGFSSMA
KLCHTLENIL DKARNSEIKI TSDLLDKIFA GVDMITRMVD KIVSEGSDDI GENIDVFSDT
IKSFASSGKE KPSEIKNETE TKGEEEHKGE STSNEEVVVL PEEVAHVLQE ARNKGFKTFY
IKVILKEGTQ LKSARIYLVF HKLEELKCEV VRTIPSVEEI EEEKFENEVE LFVISPVDLE
KLSEALSSIA DIERVIIKEV TAVTEESGAE KRTEKEEKTK KTEEKTERKK VISQTVRVDI
EKLDNLMDLM GELVIARSRI LETLKKYNIK ELDESLSHLS RITLDLQNVV MKIRMVPISF
VFNRFPRMVR DLAKKMNKEV NFIMRGEDTE LDRTFVEEIG EPLLHLLRNA IDHGIEPKEE
RIAKGKPPIG TLILSARHEG NNVVIEVEDD GRGIDKEKII RKAIEKGLID ESKAATLSDQ
EILNFLFVPG FSTKEKVSEV SGRGVGMDVV KNVVESLNGS ISIESEKDKG TKVTIRLPLT
LAIIQALLVK VNNLVYAIPI ANIDTILSVS KEDIQRVQDR DVIVIRGEVI PVYRLWEVLQ
IEHKEELEEM EAVIVRVGNR KYGIVVDDLL GQDDIVIKSL GKVFSEVKEF SGAAILGDGS
IALIINVSGI V
|
|---|
| |