Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0117 |
Symbol | |
ID | 6091519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 111873 |
End bp | 113270 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642487299 |
Product | glycoside hydrolase family 3 protein |
Protein accession | YP_001738162 |
Protein GI | 170287924 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCTTG GAAAGCTGTT CTTCTGCGGT TTCAACGACT TCAACGAAGA AGTCAAGGAA ATAATCAGAA AATACAGACC GGCCGGTATT TTGATCTATC CAGGAGTTCT TTCGAAAGAG TACCTTCTAA TGGATTTCAT GAGTTTTCTA TCGAAGGAAG GAGATTTTCT CATCAGTTCC GATCACGAGG GTGGCCAGCT TGAGGTGTTG AAATACGTTC CCTCGTCTCC GGGAAATCTT GCCTTTGGGA AAAACTCACC AGATGTGACT TACAGATATT CCAGGGTTGC GGGAAAGATC ATGGAGATTG TGGGGTTCAA CATGGTTTTT GCTCCTGTTC TGGATCTTCT TTCTGAAGAA AGCTCTTCGG TGATCGACAT GAGAAGCTAC GGCTCAGATC CCAAAATCGT AGCCGAGCAC GGGGCAAAAG CCTGTGAAGG TTATCTGGAA GGTGGAGTTA TGCCCTGCAT CAAGCACTTT CCAGGTCACG GAAGAGCGAG AGAAGACTCT CACCTCACCC TTCCTGTGGT CGATGCACCC TTTGAAAAAC TCTGGGAAGA GGATCTTCTG CCGTTCAGAA AGGTGCTGGA AAGGGAGAAA AAGGTCACGG TCATGACGGC CCACGTCAGA TACTCTTCGA TAGACAGTCT CCCGGCTACT CTTTCGGAGA AGATCATAAC GGACGTTCTC AGAAAAAAGA TCGGTTTCGA CGGTCTTGTG ATCAGTGACG CTATGGAAAT GAGCGCTGTG TCGAACAATT TCTCTGTTGA AGAGATTGTG AGTCTCTTTC TGAACGCGGG AGGAAACATG ATCCTTCTCG GTGATTACAG AAATCTTCCG GTTTACTATG AAACGCTGGT GAAACTCCTC GAGGATGGAA GGGTCCAGAA GGACAAAGTG GAGCGCTCCA TAAGGATGGT GGAAAAATAT CTTGCTTTTG CGAAGAAAAA CAGCGGTGTT GGTTTCCTCG CCGATTCTTC GGCAAAGGCT GTGGAATTCC TCGGTTTTGA AAAGATAGAT CATACCAGTG AAGTGACTCT TCTCGTTCCT TCCAGTGAGA ATCTGAGTCA GGCAGACACC ACGGGGGGCG ATTACGATCA GATTCCAGAG ATCGTTTCCA GATTTTTCGA AGTCGAGAAT GTTGTTCGAT ACACCGTAGA AGACGGTCCC GAGTTCGTTG AAGGTGATTT GATCTTCGAT TTTGTAGCCG ACATACCGAA CGAAAAGGCT TTGAAAGCCC ATCTGAGCCT TCCGGCAGAA AAGACCATCT ACTTTGTTCT GAGAAATCCG TTCGATGTCA GGTATTTCGA AGGAAGAAAG ATGGTCGTCA CAAGATCGAC AAAACCCATT TCTATCTATA AATCCTTAGA ACATTTTTTA GGGAGGTGTG ATTCATGA
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Protein sequence | MDLGKLFFCG FNDFNEEVKE IIRKYRPAGI LIYPGVLSKE YLLMDFMSFL SKEGDFLISS DHEGGQLEVL KYVPSSPGNL AFGKNSPDVT YRYSRVAGKI MEIVGFNMVF APVLDLLSEE SSSVIDMRSY GSDPKIVAEH GAKACEGYLE GGVMPCIKHF PGHGRAREDS HLTLPVVDAP FEKLWEEDLL PFRKVLEREK KVTVMTAHVR YSSIDSLPAT LSEKIITDVL RKKIGFDGLV ISDAMEMSAV SNNFSVEEIV SLFLNAGGNM ILLGDYRNLP VYYETLVKLL EDGRVQKDKV ERSIRMVEKY LAFAKKNSGV GFLADSSAKA VEFLGFEKID HTSEVTLLVP SSENLSQADT TGGDYDQIPE IVSRFFEVEN VVRYTVEDGP EFVEGDLIFD FVADIPNEKA LKAHLSLPAE KTIYFVLRNP FDVRYFEGRK MVVTRSTKPI SIYKSLEHFL GRCDS
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