Gene TRQ2_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0090 
Symbol 
ID6091490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp81510 
End bp83210 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content45% 
IMG OID642487270 
Producttype II secretion system protein E 
Protein accessionYP_001738135 
Protein GI170287897 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGAA GATACAGAAA ATTGGGTGAA ATTCTTCTGG AAAAAGGATT CATAACCAGA 
GAAGAACTGG ACAAGGCTCT TGAAATTCAA AAAGAGAAAA AAAAGCCGCT CGGAGAAGTT
CTAATTGAGA CAGGGTATAT CACGGAGGAT CAGCTGCTGG AGGCTTTGAG TGAACAATAC
GGAGTCCCAA TCCTGAAGGA ACTACCAAAA AACATACCAC TCAACGTGGT GGGTTCTATT
CCAAAGAACA TCATCGAATC TCTGCACGTC ATTCCTGTAG AAAAGAAGGA AGACGGAACT
CTCGTGGTGG TGACGGATAA CGGAACGAAC ATTCCAAGGA TCAAACAGGA GATACGTTTT
CTCACGGGGA AGAATTCGGA GATTTATCTG GTGACGAGCA GAGATTTTTC TGTTTTGTAT
CAAACGTATG TTCTTGGTGT TCCTCTCGAA CTTTTCGAGG AGCCTTACGT TGCCATAGAA
GAAACACCAG AACAGGTTGA GGAAGAAGAG GAAGAAGAAA GGGAAGTAGA AGAAGCTCCC
ATCGTCCGGC TCGTAAACAA TATCGTAAAC CGTGCCATAG AAATGGGAGC GAGTGATATC
CATATAGAAC CGATGAAAAG AACCGTGAGG GTGAGATTCA GAATAGATGG TATTTTGAGA
AAAGTTCTTG AGTATCAAAA GCCACAGCAC AACTCAGTTG TGGCACGAAT TAAAATTATG
AGTGGTCTCG ATGTGTCGGA AAGGAGGCTT CCGCAGGACG GGAAGTTTTA CACAATAAAA
AGCGGTGAGC AGTACGATTT TCGCGTGTCA ACCATGCCTT CCACTTTCGG AGAAAAAGTC
GTGATGAGGA TATTGAAGGT ATCCGATGCT AACAGGCGTC TCGAAGAACT AGGATACAGT
GAATACAACC TGAAACGAAT TCTATCACTG TTAGAAAAAC CCTACGGTAT CATCCTGGTT
ACCGGACCAA CGGGAAGCGG GAAATCCACT ACACTTGTCG CTATGATAAA TTATTTGAAG
AATGAAAGTG TGAACATAGT AACAGCGGAA GATCCTGTGG AATACACCAT CGAGGGGGTT
ACTCAGTGTC AGGTTTTCCC AGAAATAGGT CTCACGTTTG CGCGGTACTT GAGAGCTTTC
CTCAGGCAGG ACCCCGACAT CATCATGGTG GGTGAGATCA GAGACAGAGA AACCGCACAG
CTTGCGGTGG AAGCCTCCCT CACGGGACAC TTAGTTCTGA GTACGCTTCA CACCAACACC
GCTGCCGGTG CTGTCTCAAG GCTCATAGAA ATGGGAATAG ATCCTCACCT TCTCGGAGCC
TCCCTTATCG GAGTCATAGG TCAAAGGCTG GTGAGAAAGC TCTGTGATGA GTGTAAAATG
TCCGGAGAAA TCCGGGATGA ACAGGTAAAA TCTTATTTCG AACGATTCTT TGGAAAGGTA
CCGGATCAAA TTTACTATCC TTCAGAAGAG GGATGTTCTA CCTGCAAGGG GATGAGATAC
AGAGGGAGAA TGGCTATAGG GGAAGTTTTG ATTGTGGATG AAGAGTTGAG AGAATTGATC
TCTTCCAAAG CAAGTGAAAC AGAGATTGCA AAGCTTGCTG TGAAAAAAGG TATGCGCACC
ATGTTCCAGG ATGCCCTCGA GAAAGTCCTT CTTGGGCAGA CGAGCATCGA AGAGGTCTTC
AGGGTGACTA CACCGTTATG A
 
Protein sequence
MLRRYRKLGE ILLEKGFITR EELDKALEIQ KEKKKPLGEV LIETGYITED QLLEALSEQY 
GVPILKELPK NIPLNVVGSI PKNIIESLHV IPVEKKEDGT LVVVTDNGTN IPRIKQEIRF
LTGKNSEIYL VTSRDFSVLY QTYVLGVPLE LFEEPYVAIE ETPEQVEEEE EEEREVEEAP
IVRLVNNIVN RAIEMGASDI HIEPMKRTVR VRFRIDGILR KVLEYQKPQH NSVVARIKIM
SGLDVSERRL PQDGKFYTIK SGEQYDFRVS TMPSTFGEKV VMRILKVSDA NRRLEELGYS
EYNLKRILSL LEKPYGIILV TGPTGSGKST TLVAMINYLK NESVNIVTAE DPVEYTIEGV
TQCQVFPEIG LTFARYLRAF LRQDPDIIMV GEIRDRETAQ LAVEASLTGH LVLSTLHTNT
AAGAVSRLIE MGIDPHLLGA SLIGVIGQRL VRKLCDECKM SGEIRDEQVK SYFERFFGKV
PDQIYYPSEE GCSTCKGMRY RGRMAIGEVL IVDEELRELI SSKASETEIA KLAVKKGMRT
MFQDALEKVL LGQTSIEEVF RVTTPL