Gene TRQ2_0024 details

Gene Information

• Locus tag: TRQ2_0024
• ID: 6091423
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 23073
• End bp: 23546
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642487203
• Product: chemoreceptor glutamine deamidase CheD
• Protein accession: YP_001738069
• Protein GI: 170287831
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.375225
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG TCATCGGAAT AGGAGAATAC GCGGTTATGA AGAATCCTGG AGTGATTGTG 
ACCCTTGGGT TGGGATCCTG CGTTGCTGTA TGTATGAGAG ATCCTGTGGC AAAAGTCGGA 
GCCATGGCAC ACGTTATGCT TCCAGACAGC GGCGGAAAAA CGGACAAACC CGGCAAATAC 
GCGGACACGG CTGTAAAAAC GCTGGTGGAA GAGTTGAAGA AAATGGGAGC AAAGGTGGAA 
AGACTGGAAG CAAAAATAGC GGGCGGAGCC AGCATGTTTG AATCTACGGG GATGAACATA 
GGAGCGAGGA ACGTAGAGGC TGTGAAAAAA CATCTGAAGG ATTTTGGAAT CAAACTACTG 
GCGGAGGACA CGGGGGGCAA CAGAGCAAGG AGCGTTGAAT ACAATATTGA AACTGGAAAG 
CTTCTCGTGA GAAAAGTAGG TGGTGGTGAA CAATTAGAAA TAAAAGAAAT TTAG 

 

Protein sequence

MKKVIGIGEY AVMKNPGVIV TLGLGSCVAV CMRDPVAKVG AMAHVMLPDS GGKTDKPGKY 
ADTAVKTLVE ELKKMGAKVE RLEAKIAGGA SMFESTGMNI GARNVEAVKK HLKDFGIKLL 
AEDTGGNRAR SVEYNIETGK LLVRKVGGGE QLEIKEI