Gene TRQ2_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0024 
Symbol 
ID6091423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp23073 
End bp23546 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content47% 
IMG OID642487203 
Productchemoreceptor glutamine deamidase CheD 
Protein accessionYP_001738069 
Protein GI170287831 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG1871] Chemotaxis protein; stimulates methylation of MCP proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.375225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TCATCGGAAT AGGAGAATAC GCGGTTATGA AGAATCCTGG AGTGATTGTG 
ACCCTTGGGT TGGGATCCTG CGTTGCTGTA TGTATGAGAG ATCCTGTGGC AAAAGTCGGA
GCCATGGCAC ACGTTATGCT TCCAGACAGC GGCGGAAAAA CGGACAAACC CGGCAAATAC
GCGGACACGG CTGTAAAAAC GCTGGTGGAA GAGTTGAAGA AAATGGGAGC AAAGGTGGAA
AGACTGGAAG CAAAAATAGC GGGCGGAGCC AGCATGTTTG AATCTACGGG GATGAACATA
GGAGCGAGGA ACGTAGAGGC TGTGAAAAAA CATCTGAAGG ATTTTGGAAT CAAACTACTG
GCGGAGGACA CGGGGGGCAA CAGAGCAAGG AGCGTTGAAT ACAATATTGA AACTGGAAAG
CTTCTCGTGA GAAAAGTAGG TGGTGGTGAA CAATTAGAAA TAAAAGAAAT TTAG
 
Protein sequence
MKKVIGIGEY AVMKNPGVIV TLGLGSCVAV CMRDPVAKVG AMAHVMLPDS GGKTDKPGKY 
ADTAVKTLVE ELKKMGAKVE RLEAKIAGGA SMFESTGMNI GARNVEAVKK HLKDFGIKLL
AEDTGGNRAR SVEYNIETGK LLVRKVGGGE QLEIKEI