Gene TRQ2_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0017 
Symbol 
ID6091416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp15985 
End bp16755 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content45% 
IMG OID642487196 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_001738062 
Protein GI170287824 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0256175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGACCA TATTCAGTTT TCTCGAGGAA AAATTCCTTG CGTGGATGTG TATTTTCACG 
AGGTTTACGG GATTTTTTTT GATCGCTCCT TTCTTTTCCG AGAGAGCGTT CCCTGTTGAG
GTGAGAGTGT TTCTGGGACT GTTCACGAGC TGGTTGATGC TTTTCACAGT TGATGTATCC
ATACCCTTGA ACACACCTGT TTTGAGTTTC ACTTTGAATC TGTTTTTCAA CTTTCTCGTT
GGGTTCGGAA TCGGTTTTAT CGTTTATCTT TTTCTTCAGG CGTTCAACGG GGCGGGATAC
ATCTTTGGTT TTCAAATCGG ATTCGGAATG GAAGAAGTGC TGGCTTTCGG TGAAGAAGAA
ACAAACCCCA CGGGAGAATT GGTTTATTTT ATAGCCCTCA CTGTTTTTGT GCTGATAAAG
GGACCTGTTC TCGTGTTCGA GGGCTTGAAG GATTCAATCG ATGTCTTCCC CGTGAATCTC
ACAGGTGTTG CGGACGGGTT CTTCTCCTAC GTCGTGGAAA GATCGAGTGA CTTCTTTGTG
CTGATCCTGA AGATAGGAGC ACCAGTTATC GCTTTCATGC TCATCATAAG CATCGTTCTC
GGTATCGTTT CGAGGCTCAT CCCACAGATG AACGTTTTCA TGGTTGGATT GCCCCTGAAA
GTGATCATTG GGGTTATATT GATTCTGGGG ATGTTACCGA TATGGGCGGA AGTGGCTCAG
AAGATTTCAG CGCTCAGCTG GAACGCTATT CAGGAACTTC TTGGGAAATA G
 
Protein sequence
METIFSFLEE KFLAWMCIFT RFTGFFLIAP FFSERAFPVE VRVFLGLFTS WLMLFTVDVS 
IPLNTPVLSF TLNLFFNFLV GFGIGFIVYL FLQAFNGAGY IFGFQIGFGM EEVLAFGEEE
TNPTGELVYF IALTVFVLIK GPVLVFEGLK DSIDVFPVNL TGVADGFFSY VVERSSDFFV
LILKIGAPVI AFMLIISIVL GIVSRLIPQM NVFMVGLPLK VIIGVILILG MLPIWAEVAQ
KISALSWNAI QELLGK