| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0005 |
|---|
| Symbol | |
|---|
| ID | 6091404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 4280 |
|---|
| End bp | 5782 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642487184 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_001738050 |
|---|
| Protein GI | 170287812 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTGA GAGTAGCAAC CGCCCAGGAG ATGAAAGAGA TCGATGAATT GACGATAAAA
GAATACGGTG TGGACTCGAG AATCCTCATG GAACGGGCAG GGATTTCCGT TGTTCTCGCA
ATGGAGGAGG AACTTGGAAA TCTTTCTGAT TACAGATTCC TGGTTCTCTG CGGGGGAGGA
AACAACGGAG GAGACGGCTT TGTCGTGGCC AGAAACCTCC TCGGTGTGGC AAAAGATGTC
TTGGTTGTCT TTCTTGGAAA GAAAAAAACT CCCGATTGTG AGTACAACTA CGGTCTTTAC
AAAAAGTTTG GAGGAAAAGG GGTGGAACAA TTCAAACCCT CTATTCTGAA CGAATTCGAT
GTGGTGGTTG ACGCCATTTT TGGAACGGGC CTGAGAGGAG AAATCACGGG AGAGTACGCT
GAGATAATAA ATCTCGTGAA TAAATCGGGA AAAATAGTTG TTTCCGTTGA CGTTCCATCG
GGAATAGATT CGAACACGGG GAAGGTTCTT GGAACAGCGG TGAAAGCGGA TCTCACGGTT
ACCTTTGGAG TTCCCAAGAT AGGTCACATC CTCTTTCCAG GAAGAGATCT CACAGGAAAG
CTCAAAGTCG CCAACATAGG TCATCCTGTT CATCTGATCG ATTCGATCAA TCGATACGTG
ATAACACGGG AAATGGTTCG TTCCCTTCTG CCGGAAAGAC CCAGAGATTC CCACAAGGGA
ACCTACGGAA AAGTGCTGAT AATAGCAGGG TCCAGACTGT ACTCTGGAGC TCCCGTTCTC
TCTGGAATGG GATCCTTGAA AGTGGGAACG GGTCTTGTGA AGCTCGCAGT TCCTTTTCCA
CAGAATTTGA TCGCTACTTC GAGATTTCCA GAACTCATTT CCGTTCCCAT AGATACAGAA
AAAGGCTTCT TCAGCCTGCA GAATCTTCAG GAATGTCTGG AGCTATCAAA AGACGTGGAT
GTGGTAGCCA TCGGGCCGGG TCTTGGAAAC AATGAACACG TGAGGGAGTT TGTCAACGAG
TTTTTGAAAA CACTCGAAAA ACCGGCTGTC ATCGATGCCG ATGCCATCAA CGTTCTGGAT
ATCTCTGTTC TGAAGGAGAG AAAATCCCCT GCGGTACTAA CCCCACATCC TGGGGAGATG
GCAAGACTCG TGAAAAAAAC TGTTGGGGAC GTCAAGTACA ATTACGAACT GGCAGAGGAG
TTTGCAAAAG AAAACGACTG CGTGCTGGTT TTGAAATCTG CCACCACCAT CGTAACAGAT
GGTGGGAGAA CTCTGTTCAA TATAACGGGA AACACAGGAC TTTCAAAGGG AGGAAGCGGA
GATGTTCTGA CAGGAATGAT AGCCGGCTTT ATGGCACAGG GACTTTCCCC TCTCGAAGCT
TCCACGGTTT CTGTGTATCT ACACGGTTTT GCCGCGGAGC TTTTTGAACA GGATGAAAGA
GGGCTCACCG CTTCCGAGTT ACTGCGCCTC ATACCTGAGG CTATAAGGAG GTTGAAAGAA
TGA
|
|---|
| Protein sequence | MRVRVATAQE MKEIDELTIK EYGVDSRILM ERAGISVVLA MEEELGNLSD YRFLVLCGGG
NNGGDGFVVA RNLLGVAKDV LVVFLGKKKT PDCEYNYGLY KKFGGKGVEQ FKPSILNEFD
VVVDAIFGTG LRGEITGEYA EIINLVNKSG KIVVSVDVPS GIDSNTGKVL GTAVKADLTV
TFGVPKIGHI LFPGRDLTGK LKVANIGHPV HLIDSINRYV ITREMVRSLL PERPRDSHKG
TYGKVLIIAG SRLYSGAPVL SGMGSLKVGT GLVKLAVPFP QNLIATSRFP ELISVPIDTE
KGFFSLQNLQ ECLELSKDVD VVAIGPGLGN NEHVREFVNE FLKTLEKPAV IDADAINVLD
ISVLKERKSP AVLTPHPGEM ARLVKKTVGD VKYNYELAEE FAKENDCVLV LKSATTIVTD
GGRTLFNITG NTGLSKGGSG DVLTGMIAGF MAQGLSPLEA STVSVYLHGF AAELFEQDER
GLTASELLRL IPEAIRRLKE
|
|---|
| |