| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4279 |
|---|
| Symbol | |
|---|
| ID | 6068097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4732553 |
|---|
| End bp | 4733218 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641603716 |
|---|
| Product | 6-phosphogluconate phosphatase |
|---|
| Protein accession | YP_001727202 |
|---|
| Protein GI | 170022248 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGA TAGAAGCGGT ATTTTTCGAC TGCGACGGTA CGCTGGTCGA TAGCGAGGTC
ATTTGCTCTC GCGCATATGT AACGATGTTT CAGGAATTTG GTATTACGCT CGATCCTGAA
GAGGTATTCA AACGTTTCAA GGGTGTAAAA CTGTACGAAA TTATCGATAT TGTTTCCCTT
GAACATGGTG TTACGTTAGC GAAAACAGAA GCTGAACACG TTTACCGTGC AGAAGTCGCT
CGGCTGTTCG ATTCAGAACT GGAAGCCATC GAAGGGGCTG GAGCGCTCCT GTCAGCGATC
ACTGCGCCAA TGTGTGTGGT ATCTAACGGC CCAAATAACA AAATGCAGCA TTCTATGGGC
AAGCTGAATA TGTTGCACTA CTTCCCGGAT AAACTGTTCA GCGGCTACGA TATTCAGCGC
TGGAAGCCAG ACCCGGCGTT AATGTTCCAT GCGGCAAAAG CGATGAATGT AAATGTAGAA
AACTGCATTC TGGTTGATGA CTCAGTTGCC GGTGCGCAAT CTGGTATCGA CGCAGGTATG
GAAGTGTTCT ACTTCTGCGC CGACCCGCAC AATAAGCCGA TCGTTCACCC GAAAGTCACC
ACCTTTACCC ATCTTTCGCA GTTACCGGAA CTGTGGAAAG CGCGTGGTTG GGATATTACG
GCATAG
|
|---|
| Protein sequence | MSQIEAVFFD CDGTLVDSEV ICSRAYVTMF QEFGITLDPE EVFKRFKGVK LYEIIDIVSL
EHGVTLAKTE AEHVYRAEVA RLFDSELEAI EGAGALLSAI TAPMCVVSNG PNNKMQHSMG
KLNMLHYFPD KLFSGYDIQR WKPDPALMFH AAKAMNVNVE NCILVDDSVA GAQSGIDAGM
EVFYFCADPH NKPIVHPKVT TFTHLSQLPE LWKARGWDIT A
|
|---|
| |