| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4174 |
|---|
| Symbol | |
|---|
| ID | 6067258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4611430 |
|---|
| End bp | 4612035 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641603602 |
|---|
| Product | sterol-binding domain-containing protein |
|---|
| Protein accession | YP_001727098 |
|---|
| Protein GI | 170022144 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00890552 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTTA AACCTTTAGT GACGGCAGGA ATTGAAAGTC TGCTCAACAC CTTCCTGTAT
CGCTCACCCG CGCTGAAAAC GGCCCGCTCG CGTCTGCTGG GTAAAGTATT GCGCGTGGAG
GTAAAAGGCT TTTCGACGTC ATTGATTCTG GTGTTCAGCG AACGCCAGGT TGATGTACTG
GGCGAATGGG CAGGCGATGC TGACTGCACC GTTATCGCCT ACGCCAGTGT GTTGCCGAAA
CTTCGCGATC GCCAGCAGCT TACCGCACTG ATTCGCAGTG GTGAGCTGGA AGTGCAGGGC
GATATTCAGG TGGTGCAAAA CTTCGTTGCT CTGGCAGATC TGGCAGAGTT CGACCCTGCG
GAACTGCTGG CCCCTTATAC CGGTGATATC GCCGCTGAAG GAATCAGCAA AGCCATGCGC
GGAGGCGCAA AGTTCCTGCA TCACGGCATT AAGCGCCAGC AACGTTATGT GGCGGAAGCC
ATTACTGAAG AGTGGCGTAT GGCACCCGGT CCGCTTGAAG TGGCCTGGTT TGCGGAAGAG
ACGGCTGCCG TCGAGCGTGC TGTTGATGCC CTGACCAAAC GGCTGGAAAA ACTGGAGGCT
AAATGA
|
|---|
| Protein sequence | MPFKPLVTAG IESLLNTFLY RSPALKTARS RLLGKVLRVE VKGFSTSLIL VFSERQVDVL
GEWAGDADCT VIAYASVLPK LRDRQQLTAL IRSGELEVQG DIQVVQNFVA LADLAEFDPA
ELLAPYTGDI AAEGISKAMR GGAKFLHHGI KRQQRYVAEA ITEEWRMAPG PLEVAWFAEE
TAAVERAVDA LTKRLEKLEA K
|
|---|
| |