| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4136 |
|---|
| Symbol | |
|---|
| ID | 6066230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4562212 |
|---|
| End bp | 4563645 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641603557 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001727060 |
|---|
| Protein GI | 170022106 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA TCACCAGTCC TGCAACTTAT TCAATTAGTC GGCCACAGGA CGTAATTGAT
ATTGTTAATA AGAACTCTGC AATCAACACC AGTATCGGCG TTATTTTTAT TGCTTTGGGC
GGCATATTGA TTGATGCCTA CCAGGCGGCG ATGGTGGGGT TTGGTAATAA ATACATTGCC
GCTCAATTTG GCATTTCTCC AGGCCTTGCC GCAACCGTTA ATGCGTCAGT ATTAATCGCC
GCGTTAATTG GCGGTTTATT AGCGAACCGA GTAATAAACC GCTTTGGGCA AAAGCGAGCA
TTTATTATTG GCATGGGGCT GTGCACCATC GGGGCTGCTG CGGTAGCTAT TGCGCCCAGT
ATCTGGTGGG TGCTGGTGTG CCGCGTCATC ATGGGCTTTG GTTTAGGCAT CGACTTCCCT
TTGGCAACCA ATGCCGTGGC AGAGCTTCGT GGTTCAACGT CGAAGAAAAC CGGAACGTCG
GTCAACCTCT GGCAAATGGC CTGGTATGTT TCGACAACTG TTGTTTATTT GGTGCTCTTG
CCGCTGCTTC TGTCGGGTAT CGCTGAAGAA CAATTGTGGC GTTACGGAAT ATTCATCGGA
GCTATTTTTG CAGTCATCTT CATGATTTTG CGTTACTTCT TTATTGGTGA ATCCGCAATG
TGGGCCGCAC GCGTCGGGCG TTACCAGGAA GCGTGCGACA TTCTGGGAAA ACGTTATGGT
GTTCAGGCTC GCGTTGCGGC ATCGAGTACA ACAGAAGCGA AATTCTCGGA AAAAGCAGAG
AATAAATACA GTGGTGGATA TGGCATCTTA TTTAATGATC GTTACCGCAA ACGCACCATT
CTTGGCTGTG TCGTGGCAAC CATGCAGGCG TGGCAATATA ACGCCGTAGG TGTTTATCTT
CCTCTTACGT TGGCGGGAAT AATAAGTGGC GGGCTTACTG GTGCGTTGAC GGGTTCTGCC
GTCGTGAATG CCCTTTGTGG GGTGACAGGC GGGATGATCG GCTCGTTTAT TCTCCAACGA
CTGGGTACTC GCCGACAGTC GATGTATGGA TTTGCTGTTG TGACCTTAGC ATTGCTGTCG
TTAGGCGCAC TGGCAACGAC TAATCCATGG CTGTCTTTAG GGTTATTGGG ATCAATTATT
TTCTTCCATT CAGCGGGTCC TGGTGGGCTG GGCATGACCA TTGCCACACT CTCTTATCCT
CCCGCTATTC GCCCTACTGG GGTCGGATTT GCCCGCGCTA TTATGCGCAC AGGGGCAATT
GCAGGACTCA TTTTCTGGCC GATGCTGTGG GGGGCGTTGA AAACTGAAGC GTTTTACTGG
TTGGCAATCG TGCCATTCTT GGGGTTCCTG ACCTGCGTAT TGATTAATTG GGAACCACTG
GGTGCAAATG TTGATGCTGA GGATGCAGAG GTTCTGGCTG AATTGAAGAA ATAA
|
|---|
| Protein sequence | MSQITSPATY SISRPQDVID IVNKNSAINT SIGVIFIALG GILIDAYQAA MVGFGNKYIA
AQFGISPGLA ATVNASVLIA ALIGGLLANR VINRFGQKRA FIIGMGLCTI GAAAVAIAPS
IWWVLVCRVI MGFGLGIDFP LATNAVAELR GSTSKKTGTS VNLWQMAWYV STTVVYLVLL
PLLLSGIAEE QLWRYGIFIG AIFAVIFMIL RYFFIGESAM WAARVGRYQE ACDILGKRYG
VQARVAASST TEAKFSEKAE NKYSGGYGIL FNDRYRKRTI LGCVVATMQA WQYNAVGVYL
PLTLAGIISG GLTGALTGSA VVNALCGVTG GMIGSFILQR LGTRRQSMYG FAVVTLALLS
LGALATTNPW LSLGLLGSII FFHSAGPGGL GMTIATLSYP PAIRPTGVGF ARAIMRTGAI
AGLIFWPMLW GALKTEAFYW LAIVPFLGFL TCVLINWEPL GANVDAEDAE VLAELKK
|
|---|
| |