| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4099 |
|---|
| Symbol | tpiA |
|---|
| ID | 6065754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4523793 |
|---|
| End bp | 4524560 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641603521 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_001727024 |
|---|
| Protein GI | 170022070 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACATC CTTTAGTGAT GGGTAACTGG AAACTGAACG GCAGCCGCCA CATGGTTCAC
GAGCTGGTTT CTAACCTGCG TAAAGAGCTG GCAGGTGTTG CTGGCTGTGC GGTTGCAATC
GCACCACCGG AAATGTACAT CGATATGGCG AAGCGCGAAG CTGAAGGCAG CCACATCATG
CTGGGTGCGC AAAACGTGGA CCTGAACCTG TCCGGCGCAT TCACCGGTGA AACTTCTGCC
GCTATGCTGA AAGACATCGG CGCTCAGTAC ATCATCATCG GCCACTCTGA ACGTCGTACT
TACCACAAAG AGTCTGACGA ACTGATCGCG AAAAAATTCG CGGTGCTGAA AGAGCAGGGC
CTGACTCCGG TTCTGTGCAT CGGTGAAACC GAAGCTGAAA ACGAAGCGGG CAAAACTGAA
GAAGTTTGCG CACGTCAGAT CGACGCGGTA CTGAAAACTC AGGGTGCTGC GGCATTCGAA
GGTGCGGTTA TCGCTTACGA ACCTGTATGG GCAATCGGTA CTGGCAAATC TGCAACTCCG
GCTCAGGCAC AGGCTGTTCA CAAATTCATC CGTGACCACA TCGCTAAAGT TGACGCTAAC
ATCGCTGAAC AAGTGATCAT TCAGTACGGC GGCTCTGTAA ACGCGTCTAA CGCTGCAGAA
CTGTTTGCTC AGCCAGATAT CGACGGCGCG CTGGTTGGCG GTGCTTCTCT GAAAGCTGAC
GCTTTCGCAG TGATCGTTAA AGCTGCAGAA GCGGCTAAAC AGGCTTAA
|
|---|
| Protein sequence | MRHPLVMGNW KLNGSRHMVH ELVSNLRKEL AGVAGCAVAI APPEMYIDMA KREAEGSHIM
LGAQNVDLNL SGAFTGETSA AMLKDIGAQY IIIGHSERRT YHKESDELIA KKFAVLKEQG
LTPVLCIGET EAENEAGKTE EVCARQIDAV LKTQGAAAFE GAVIAYEPVW AIGTGKSATP
AQAQAVHKFI RDHIAKVDAN IAEQVIIQYG GSVNASNAAE LFAQPDIDGA LVGGASLKAD
AFAVIVKAAE AAKQA
|
|---|
| |