Gene EcolC_4095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4095 
Symbol 
ID6065704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4521579 
End bp4522007 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content43% 
IMG OID641603517 
Productuniversal stress protein UspD 
Protein accessionYP_001727020 
Protein GI170022066 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATA AACACATTGG CGTGGCAATT TCCGGGAATG AAGAAGATGC CTTACTGGTG 
AATAAAGCCC TGGAGCTCGC CAGACATAAT GACGCTCACC TGACGTTAAT TCATATTGAT
GATGGCTTAA GCGAGTTGTA TCCGGGTATC TACTTCCCTG CAACAGAAGA TATTCTTCAA
TTGTTGAAGA ATAAGTCGGA TAACAAGCTG TATAAACTGA CGAAAAATAT TCAATGGCCG
AAGACAAAAC TGCGTATTGA ACGCGGAGAA ATGCCGGAAA CACTGCTGGA AATTATGCAA
AAAGAGCAGT GCGACCTCCT TGTCTGTGGT CATCATCACT CATTTATCAA CCGTTTGATG
CCGGCATATC GCGGGATGAT CAATAAGATG AGTGCGGATT TGCTCATCGT GCCGTTTATC
GATAAGTAA
 
Protein sequence
MAYKHIGVAI SGNEEDALLV NKALELARHN DAHLTLIHID DGLSELYPGI YFPATEDILQ 
LLKNKSDNKL YKLTKNIQWP KTKLRIERGE MPETLLEIMQ KEQCDLLVCG HHHSFINRLM
PAYRGMINKM SADLLIVPFI DK