Gene EcolC_4019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4019 
SymbolpurH 
ID6064586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4425743 
End bp4427332 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content56% 
IMG OID641603434 
Productbifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 
Protein accessionYP_001726945 
Protein GI170021991 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 
TIGRFAM ID[TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000504089 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC GTCGTCCAGT CCGCCGCGCT CTGCTCAGTG TTTCTGACAA AGCCGGTATC 
GTCGAATTCG CCCAGGCACT TTCCGCACGC GGTGTGGAGC TGCTGTCTAC AGGGGGCACT
GCCCGTCTGT TAGCAGAAAA AGGTCTGCCG GTAACCGAAG TTTCCGATTA CACCGGTTTC
CCGGAGATGA TGGATGGACG CGTGAAGACC CTGCATCCGA AAGTACATGG TGGCATTCTG
GGCCGTCGCG GCCAGGACGA TGCCATTATG GAAGAACATC AGATCCAGCC TATCGATATG
GTGGTTGTTA ACCTGTATCC GTTCGCCCAG ACCGTGGCCC GTGAAGGTTG CTCGCTGGAA
GATGCGGTTG AGAACATCGA TATCGGCGGC CCAACGATGG TGCGCTCCGC CGCCAAGAAC
CATAAAGATG TCGCAATCGT GGTGAAGAGC AGCGACTATG ACGCCATTAT TAAAGAGATG
GATGACAACG AAGGATCGCT GACGCTTGCA ACCCGTTTCG ACCTCGCCAT CAAAGCCTTC
GAACACACTG CCGCCTACGA CAGCATGATT GCCAACTACT TCGGCAGCAT GGTTCCGGCT
TACCACGGTG AAAGCAAAGA AGCCGCCGGT CGCTTCCCAC GCACGCTGAA CCTGAACTTC
ATTAAGAAGC TGGATATGCG TTACGGCGAG AACAGCCACC AGCAGGCTGC CTTCTATATA
GAAGAGAATG TGAAAGAAGC CTCCGTTGCT ACCGCAACCC AGGTTCAGGG TAAAGCCCTC
TCTTATAACA ACATCGCCGA TACCGATGCG GCGCTGGAGT GCGTGAAAGA GTTCGCCGAG
CCGGCATGTG TGATTGTGAA GCACGCCAAC CCTTGCGGCG TGGCTATCGG CAATTCCATT
CTTGATGCTT ACGATCGCGC GTACAAAACC GACCCAACCT CCGCATTCGG CGGCATCATT
GCCTTTAACC GCGAGCTGGA TGCGGAAACC GCACAGGCCA TCATTTCTCG TCAGTTTGTC
GAAGTGATTA TTGCGCCGTC CGCCAGCGAA GAAGCCCTGA AAATCACCGC CGCCAAACAG
AACGTACGCG TTCTGACCTG CGGTCAGTGG GGCGAGCGTG TTCCGGGCCT CGATTTCAAA
CGCGTGAACG GCGGTCTGCT GGTTCAGGAT CGTGACCTGG GGATGGTCGG TGCGGAAGAA
CTGCGCGTGG TGACCAAACG TCAGCCGAGC GAACAGGAAC TGCGTGATGC GCTGTTCTGC
TGGAAGGTGG CGAAGTTTGT GAAATCCAAC GCTATCGTCT ATGCCAAAAA CAATATGACT
ATCGGCATTG GCGCGGGCCA GATGAGCCGC GTGTACTCCG CAAAAATCGC CGGTATTAAA
GCGGCCGATG AAGGCCTGGA AGTGAAAGGT TCCTCGATGG CTTCTGACGC GTTCTTCCCG
TTCCGCGACG GTATTGATGC CGCCGCCGCT GCGGGCGTGA CCTGCGTAAT CCAGCCTGGC
GGTTCTATCC GTGATGACGA AGTGATTGCC GCCGCCGACG AGCACGGTAT TGCGATGCTC
TTCACCGACA TGCGCCACTT CCGCCATTAA
 
Protein sequence
MQQRRPVRRA LLSVSDKAGI VEFAQALSAR GVELLSTGGT ARLLAEKGLP VTEVSDYTGF 
PEMMDGRVKT LHPKVHGGIL GRRGQDDAIM EEHQIQPIDM VVVNLYPFAQ TVAREGCSLE
DAVENIDIGG PTMVRSAAKN HKDVAIVVKS SDYDAIIKEM DDNEGSLTLA TRFDLAIKAF
EHTAAYDSMI ANYFGSMVPA YHGESKEAAG RFPRTLNLNF IKKLDMRYGE NSHQQAAFYI
EENVKEASVA TATQVQGKAL SYNNIADTDA ALECVKEFAE PACVIVKHAN PCGVAIGNSI
LDAYDRAYKT DPTSAFGGII AFNRELDAET AQAIISRQFV EVIIAPSASE EALKITAAKQ
NVRVLTCGQW GERVPGLDFK RVNGGLLVQD RDLGMVGAEE LRVVTKRQPS EQELRDALFC
WKVAKFVKSN AIVYAKNNMT IGIGAGQMSR VYSAKIAGIK AADEGLEVKG SSMASDAFFP
FRDGIDAAAA AGVTCVIQPG GSIRDDEVIA AADEHGIAML FTDMRHFRH