Gene EcolC_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3968 
Symbol 
ID6064503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4359190 
End bp4359726 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID641603381 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_001726896 
Protein GI170021942 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0530108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCA GAGGCGTAAA CAAGGTTATT CTCGTTGGTA ATCTGGGTCA GGACCCGGAA 
GTACGCTACA TGCCAAATGG TGGCGCAGTT GCCAACATTA CGCTGGCTAC TTCCGAATCC
TGGCGTGATA AAGCGACCGG CGAGATGAAA GAGCAGACTG AATGGCACCG CGTTGTGCTG
TTCGGCAAAC TGGCAGAAGT GGCCAGCGAA TATCTGCGTA AAGGTTCTCA GGTTTATATC
GAAGGTCAGC TGCGTACCCG TAAATGGACC GATCAATCCG GTCAGGATCG CTACACCACA
GAAGTCGTGG TGAACGTTGG CGGCACCATG CAGATGCTGG GTGGTCGTCA GGGTGGTGGC
GCTCCGGCAG GTGGTAATAT CGGTGGTGGT CAGCCGCAGG GCGGTTGGGG TCAGCCTCAG
CAGCCGCAGG GTGGCAATCA GTTCAGCGGC GGCGCGCAGT CTCGCCCGCA GCAGTCCGCT
CCGGCAGCGC CGTCTAACGA GCCGCCGATG GACTTTGATG ATGACATTCC GTTCTGA
 
Protein sequence
MASRGVNKVI LVGNLGQDPE VRYMPNGGAV ANITLATSES WRDKATGEMK EQTEWHRVVL 
FGKLAEVASE YLRKGSQVYI EGQLRTRKWT DQSGQDRYTT EVVVNVGGTM QMLGGRQGGG
APAGGNIGGG QPQGGWGQPQ QPQGGNQFSG GAQSRPQQSA PAAPSNEPPM DFDDDIPF