Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3960 |
Symbol | actP |
ID | 6064485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 4348948 |
End bp | 4350597 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641603373 |
Product | acetate permease |
Protein accession | YP_001726888 |
Protein GI | 170021934 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.221467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAG TTCTGACGGC GCTTGCCGCC ACACTCCCTT TCGCAGCTAA CGCCGCGGAT GCTATTAGCG GGGCCGTAGA GCGCCAGCCA ACGAACTGGC AGGCGATTAT TATGTTCCTG ATTTTCGTCG TGTTTACGCT CGGCATTACT TACTGGGCAT CAAAACGCGT ACGTTCTCGT AGCGACTACT ACACGGCAGG CGGCAATATC ACAGGCTTCC AGAACGGGCT GGCGATTGCC GGTGACTATA TGTCCGCCGC CTCATTTTTG GGGATCTCCG CACTGGTGTT TACCTCCGGC TATGACGGCT TAATTTACTC GCTGGGCTTC CTGGTGGGCT GGCCGATCAT TTTGTTCCTG ATTGCCGAAC GTCTGCGTAA CCTGGGACGC TACACCTTTG CCGATGTAGC CTCTTACCGC CTGAAACAAG GGCCGATTCG TATTCTTTCG GCCTGTGGTT CTCTGGTGGT GGTGGCGCTT TACCTTATCG CTCAGATGGT AGGCGCAGGT AAACTGATCG AGCTGCTGTT TGGCCTTAAC TATCACATTG CGGTGGTGCT GGTCGGCGTG CTGATGATGA TGTATGTCCT GTTCGGCGGC ATGCTGGCGA CCACCTGGGT GCAAATTATT AAAGCCGTGC TGTTACTGTT CGGTGCCAGC TTTATGGCCT TTATGGTGAT GAAACACGTT GGCTTTAGCT TCAACAATCT GTTCAGCGAA GCGATGGCGG TACACCCGAA AGGGGTCGAC ATCATGAAGC CGGGCGGGCT GGTGAAAGAT CCGATCTCCG CGCTCTCTCT GGGTCTGGGA CTGATGTTTG GTACGGCGGG CTTGCCGCAC ATTCTGATGC GCTTCTTTAC AGTCAGCGAT GCCCGCGAAG CACGTAAGAG CGTGTTCTAC GCCACCGGGT TTATGGGCTA CTTCTATATT CTGACCTTTA TTATCGGCTT CGGCGCGATC ATGCTGGTTG GTGCGAATCC GGAATATAAA GACGCGGCGG GCCATCTGAT TGGTGGTAAC AACATGGCGG CCGTTCACCT GGCGAATGCA GTGGGCGGCA ACCTGTTCCT CGGTTTTATT TCAGCGGTTG CTTTCGCCAC TATCCTCGCG GTGGTTGCGG GTCTGACGCT GGCGGGCGCA TCCGCGGTTT CGCATGACTT GTACGCTAAC GTCTTCAAAA AAGGCGCGAC CGAACGTGAA GAGCTGCGGG TATCAAAAAT CACCGTACTG ATCCTCGGCG TGATTGCGAT TATCCTCGGC GTGCTGTTTG AGAATCAGAA CATCGCCTTT ATGGTGGGGC TGGCGTTTGC CATCGCGGCG AGCTGTAACT TCCCGATCAT TCTGCTTTCT ATGTACTGGT CGAAACTGAC CACGCGTGGC GCGATGATGG GTGGCTGGCT GGGGCTGATT ACCGCAGTAG TACTGATGAT CCTCGGCCCG ACGATTTGGG TACAGATCCT TGGTCACGAA AAAGCCATCT TCCCGTATGA ATACCCGGCG CTGTTCTCTA TCACCGTGGC ATTCCTCGGC ATCTGGTTCT TCTCGGCAAC CGATAACTCA GCGGAAGGGG CGCGCGAGCG TGAACTGTTC CGCGCGCAGT TTATCCGCTC CCAGACCGGC TTTGGCGTTG AGCAAGGCCG CGCACATTAA
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Protein sequence | MKRVLTALAA TLPFAANAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR SDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFSE AMAVHPKGVD IMKPGGLVKD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY ATGFMGYFYI LTFIIGFGAI MLVGANPEYK DAAGHLIGGN NMAAVHLANA VGGNLFLGFI SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFKKGATERE ELRVSKITVL ILGVIAIILG VLFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMMGGWLGLI TAVVLMILGP TIWVQILGHE KAIFPYEYPA LFSITVAFLG IWFFSATDNS AEGARERELF RAQFIRSQTG FGVEQGRAH
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