| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3947 |
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| Symbol | |
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| ID | 6064459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 4332931 |
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| End bp | 4334397 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641603360 |
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| Product | putative outer membrane efflux protein MdtP |
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| Protein accession | YP_001726875 |
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| Protein GI | 170021921 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAATC GTCAACTTTC ACGTCTGCTG TTGTGCAGCA TTCTCGGCAG CACGACGCTG
ATTTCCGGCT GTGCCCTGGT ACGTAAGGAT TCTGCACCTC ATCAACAGCT CAAACCGGAA
CAAATCAAAC TGGCCGACGA TATTCATCTT GCCAGCTCCG GCTGGCCGCA GGCGCAGTGG
TGGAAACAAC TCAATGACCC GCAGCTGGAT GCGCTGATCC AACGGACGCT AAGTGGTTCA
CACACCCTCG CCGAAGCGAA ACTGCGGGAA GAAAAAGCGC AGTCCCAGGC CGATTTGTTA
GATGCCGGTT CACAATTACA GGTCGCAGCG TTAGGGATGC TCAACCGCCA ACGTGTCTCG
GCGAACGGCT TTTTAAGCCC TTATTCAATG GATGCGCCAG CACTGGGTAT GGACGGGCCG
TACTATACGG AAGCCACAGT AGGTTTGTTT GCCGGACTGG ATCTTGATTT GTGGGGTGTG
CATCGCTCAG CGGTTGCCGC CGCCATTGGC GCGCATAATG CCGCGCTGGC AGAAACCGCA
GCAGTAGAGC TATCGCTGGC CACGGGCGTA GCGCAGCTTT ATTACAGTAT GCAGGCCAGC
TATCAGATGC TCGATCTGTT AGAACAAACT CACGATGTGA TTGATTACGC GGTGAAAGCG
CACCAGAGTA AAGTGGCGCA CGGTCTGGAA GCGCAAGTGC CTTTCCACGG CGCGCGGGCA
CAGATTCTGG CGGTCGATAA ACAAATTGTT GCCGTCAAAG GGCAAATCAC CGAAACGCGA
GAATCTCTGC GTGCATTGAT TGGCGCGGGA GCCAGCGATA TGCCGGAGAT CAGACCGGTG
GCATTACCGC AAGTCCAGAC CGGCATTCCG GCGACACTCT CTTATGAGTT GCTCGCCAGA
CGCCCGGATC TGCAAGCCAT GCGCTGGTAT GTTCAGGCGT CATTAGATCA GGTGGATTCC
GCGCGGGCGT TGTTCTATCC GAGCTTTGAT ATCAAAGCGT TTTTCGGTCT GGACTCCATC
CATCTGCATA CCTTATTCAA AAAAACCAGT CGCCAGTTCA ACTTCATCCC GGGTCTGAAA
TTGCCGCTGT TTGACGGTGG ACGGTTGAAT GCCAATCTCG AAGGCACGCG CGCCGCCAGC
AACATGATGA TTGAACGTTA CAACCAGTCA GTACTGAACG CGGTGCGTGA CGTTGCCGTC
AACGGCACGC GTCTGCAAAC GCTCAACGAC GAGCGAGAAA TGCAGGCTGA ACGCGTGGAA
GCCACGCGCT TTACCCAGCG CGCTGCCGAG GCCGCCTATC AGCGCGGCTT AACCAGCCGC
TTACAGGCCA CCGAAGCCCG GTTGCCAGTG CTTGCCGAAG AGATGTCATT ACTGATGCTG
GACAGCCGCC GGGTGATCCA AAGCATTCAG TTGATGAAAT CGCTGGGCGG CGGGTATCAG
GCAGGTCCCG TCGTCGAGAA AAAATAA
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| Protein sequence | MINRQLSRLL LCSILGSTTL ISGCALVRKD SAPHQQLKPE QIKLADDIHL ASSGWPQAQW
WKQLNDPQLD ALIQRTLSGS HTLAEAKLRE EKAQSQADLL DAGSQLQVAA LGMLNRQRVS
ANGFLSPYSM DAPALGMDGP YYTEATVGLF AGLDLDLWGV HRSAVAAAIG AHNAALAETA
AVELSLATGV AQLYYSMQAS YQMLDLLEQT HDVIDYAVKA HQSKVAHGLE AQVPFHGARA
QILAVDKQIV AVKGQITETR ESLRALIGAG ASDMPEIRPV ALPQVQTGIP ATLSYELLAR
RPDLQAMRWY VQASLDQVDS ARALFYPSFD IKAFFGLDSI HLHTLFKKTS RQFNFIPGLK
LPLFDGGRLN ANLEGTRAAS NMMIERYNQS VLNAVRDVAV NGTRLQTLND EREMQAERVE
ATRFTQRAAE AAYQRGLTSR LQATEARLPV LAEEMSLLML DSRRVIQSIQ LMKSLGGGYQ
AGPVVEKK
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