Gene EcolC_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3923 
Symbol 
ID6064407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4310739 
End bp4311518 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID641603336 
Productphosphonate ABC transporter, inner membrane subunit 
Protein accessionYP_001726851 
Protein GI170021897 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3639] ABC-type phosphate/phosphonate transport system, permease component 
TIGRFAM ID[TIGR01097] phosphonate ABC transporter, permease protein PhnE 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCA TCACCATCGC CCCACCCAAG CGCAGCTGGT TCTCGCTTCT GAGCTGGGCC 
GTTGTTCTCG CCGTGCTGGT CGTCTCGTGG CAGGGCGCGG AAATGGCCCC GCTCACGCTG
ATTAAAGACG GCGGCAACAT GGCAACCTTC GCTGCCGACT TCTTCCCGCC CGATTTCAGC
CAGTGGCAGG ATTACCTCAC CGAAATGGCC GTCACGCTGC AAATCGCCGT CTGGGGCACC
GCGCTGGCGG TGGTTCTCTC CATCCCCTTT GGCCTGATGA GCGCCGAAAA CCTGGTGCCG
TGGTGGGTTT ACCAGCCCGT TCGCCGCCTG ATGGACGCCT GCCGCGCCAT TAACGAAATG
GTCTTCGCCA TGCTGTTCGT GGTCGCCGTC GGTCTCGGAC CGTTCGCTGG CGTGCTGGCG
CTATTTATCC ACACCACCGG CGTGCTCTCC AAGCTGCTTT CCGAAGCGGT AGAAGCAATT
GAACCTGGCC CGGTGGAAGG CATTCGCGCC ACCGGTGCCA ACAAGCTCGA AGAGATCCTC
TACGGCGTGC TGCCGCAGGT GATGCCGCTG CTGATCTCCT ACTCCCTCTA TCGCTTCGAA
TCCAACGTCC GCTCGGCGAC CGTCGTCGGC ATGGTCGGCG CGGGCGGGAT CGGCGTCACC
CTGTGGGAAG CGATTCGCGG TTTCCAGTTC CAACAAACCT GCGCCCTGAT GGTGCTTATC
ATCGTCACGG TCAGCCTGCT GGATTTCCTC TCTCAACGGT TGCGTAAGCA CTTTATCTGA
 
Protein sequence
MQTITIAPPK RSWFSLLSWA VVLAVLVVSW QGAEMAPLTL IKDGGNMATF AADFFPPDFS 
QWQDYLTEMA VTLQIAVWGT ALAVVLSIPF GLMSAENLVP WWVYQPVRRL MDACRAINEM
VFAMLFVVAV GLGPFAGVLA LFIHTTGVLS KLLSEAVEAI EPGPVEGIRA TGANKLEEIL
YGVLPQVMPL LISYSLYRFE SNVRSATVVG MVGAGGIGVT LWEAIRGFQF QQTCALMVLI
IVTVSLLDFL SQRLRKHFI