| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3690 |
|---|
| Symbol | |
|---|
| ID | 6064438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4038814 |
|---|
| End bp | 4039539 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641603108 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001726628 |
|---|
| Protein GI | 170021674 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0223527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000764296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCAG GATGCTGCAA AAATGGAATT GTTATCAGTA AAATACCTGT TATGCAAGCA
GGGTTAAAAG AGGTCATGAG GACTCACTTC CCTGAATATG AAATAATATC CAGCGCCTCT
GCGGAGGACC TTACCTTATT ACAATTACGT CGTTCCGGAT TAGTCATTGC TGATTTAGCC
GGTGAAAGTG AAGATCCACG TTCTGTTTGT GAACATTATT ATTCTTTAAT CTCACAATAT
CGGGAAATTC ACTGGGTTTT CATGGTGTCA CGCTCCTGGT ATTCCCAGGC AGTAGAATTG
CTCATGTGCC CTACGGCGAC GTTATTGTCT GATGTTGAAC CCATTGAGAA TCTGGTCAAG
ACCGTACGTT CCGGCAATAC GCACGCAGAG CGTATCAGCG CCATGCTGAC CTCTCCGGCA
ATGACTGAAA CTCATGATTT TAGCTATCGC TCCGTCATTC TCACTCTTTC AGAGCGCAAG
GTACTGCGGC TATTAGGTAA AGGATGGGGC ATCAACCAGA TAGCTTCGTT GCTTAAGAAA
AGTAATAAAA CTATCAGCGC CCAAAAAAAC AGTGCGATGC GTCGACTGGC AATTCACAGC
AACGCTGAAA TGTATGCATG GATAAATAGC GCGCAGGGTG CAAGAGAACT TAACTTGCCT
TCTGTTTATG GAGATGCCGC AGAATGGAAC ACAGCCGAAT TAAGAAGAGA AATGTCGCAC
TCATAG
|
|---|
| Protein sequence | MLPGCCKNGI VISKIPVMQA GLKEVMRTHF PEYEIISSAS AEDLTLLQLR RSGLVIADLA
GESEDPRSVC EHYYSLISQY REIHWVFMVS RSWYSQAVEL LMCPTATLLS DVEPIENLVK
TVRSGNTHAE RISAMLTSPA MTETHDFSYR SVILTLSERK VLRLLGKGWG INQIASLLKK
SNKTISAQKN SAMRRLAIHS NAEMYAWINS AQGARELNLP SVYGDAAEWN TAELRREMSH
S
|
|---|
| |