Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3637 |
Symbol | nhaR |
ID | 6065391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3982681 |
End bp | 3983586 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641603052 |
Product | transcriptional activator NhaR |
Protein accession | YP_001726575 |
Protein GI | 170021621 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGT CTCATATCAA TTACAACCAC TTGTATTACT TCTGGCATGT TTATAAAGAA GGTTCTGTGG TTGGCGCAGC GGAGGCGCTT TATTTAACAC CACAAACCAT TACCGGACAG ATTCGGGCGC TGGAAGAGCG CCTGCAAGGC AAATTATTTA AGCGCAAGGG ACGTGGTCTC GAACCCAGCG AGCTGGGAGA GCTGGTCTAT CGCTATGCCG ATAAAATGTT CACCTTAAGC CAGGAAATGC TGGATATCGT GAACTATCGC AAAGAATCCA ATTTATTGTT TGACGTTGGC GTGGCTGATG CACTTTCCAA ACGCCTGGTC AGTAGCGTGC TGAATGCTGC AGTAGTAGAA GGCGAACCGA TTCATCTTCG CTGCTTCGAA TCCACCCACG AAATGCTGCT GGAGCAATTA AGCCAGCATA AACTGGATAT GATCATTTCC GACTGTCCGA TAGATTCTAC GCAGCAGGAA GGCCTGTTCT CCGTGAGAAT TGGCGAATGT GGCGTGAGCT TCTGGTGTAC AAATCCACCA CCGGAAAAAC CGTTCCCGGC TTGTCTGGAA GACCGGCGGC TTTTGATTCC TGGACGACGT TCAATGTTAG GGCGTAAATT GCTTAACTGG TTTAACTCCC AGGGATTAAA CGTAGAAATC CTCGGCGAGT TTGATGATGC CGCGTTGATG AAAGCTTTTG GTGCGATGCA CAATGCAATC TTCGTTGCCC CAACGCTTTA TGCATATGAC TTTTATGCCG ATAAAACTGT CGTAGAAATT GGTCGCGTCG AGAATGTGAT GGAAGAGTAT CATGCTATTT TTGCTGAGCG GATGATTCAG CACCCGGCGG TACAGCGAAT CTGCAATACG GATTATTCTG CGCTTTTTAG TCCAGCAGCA CGTTAA
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Protein sequence | MSMSHINYNH LYYFWHVYKE GSVVGAAEAL YLTPQTITGQ IRALEERLQG KLFKRKGRGL EPSELGELVY RYADKMFTLS QEMLDIVNYR KESNLLFDVG VADALSKRLV SSVLNAAVVE GEPIHLRCFE STHEMLLEQL SQHKLDMIIS DCPIDSTQQE GLFSVRIGEC GVSFWCTNPP PEKPFPACLE DRRLLIPGRR SMLGRKLLNW FNSQGLNVEI LGEFDDAALM KAFGAMHNAI FVAPTLYAYD FYADKTVVEI GRVENVMEEY HAIFAERMIQ HPAVQRICNT DYSALFSPAA R
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